Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00837 ATGTCAGTGACGTTACCGTCTCCGGCGTCTACTGCCGCCGCATCACCACAAACCCCCCTCGGTAGTAAAGCCCCACCGCCATCTCCCTCCACCACCACACCACCACCGCAGGCCTCGTCTCCACCACCGGATAATTCAACTTCGCCTCCTTCCCAGCCCAACGCGGATCCTGTAGCACCTCCAACAGCTTCACCGCCAGCCCCACCTCCGGCCACTCCGTCAGCTCCTCCTCCTGCTGTGCCGTCATCTCCACCATCACAGCCACCTCTGGCATCACcacctcctcctccttctGGGACTCCACCACCCCCATTGACACCTTCAGTAGCTCCACCTCCGGCCACTCCGTCAGCTCCTCCTCCTGCTGTGCCGTCATCTCCACCATCACAACCACCTCTGGCATCAGCACCTCCGCCTCCACCCCCAATAAATTCACCTGTGCCACCCCCTCTTccatcaccaccaccaccaccaccagctCACGACTCGCCTCCACCTCCAGCATCAAGTCCACCTGAAAATTCACCCCCGCCACAAATAGCTCTGCCAGCTCCAAGAAATTCACCACCACCCAGGAATTCACCCCCGCCACCAGTAGCTGAGCCTCCTCGGAATTCATCTCCACCGCAAGCATCAGCCCCTTCTCCGCTCTCACCACCCCGTCCAGCATCTAGACCTCCAAGTAGTTCGCCCCCTCCTCCTAGGACAACTCCACCTACCCCATCTCCTTCAAATTCTACATCAAAGTCGTCTCCCCCACCACCTGGGATACAATTGGCTCCGCCTCCGCCCCCACCTGTTTCAGCGGGACCCTCTCAAGCTCCCACCCCACCATCAATAAATGGAGAGGAAACCTCAAATTCTAGAGGCATTGGTATTGGTGGAATAGTAGCTATAGCTGTAGTGGCGGGAATTTTAGCATTTGCCTTCATTGGATTCGCTATCTGGTGCATGaggagacaaaagaaaaagccaCCTGGTAATGGCCGTTACGTCATGCCATCTGCTCTTCCCTCATCACCTGAATCAGATTCTTCGTTTTTTAAGACGCATTCTTCAGCTCCTCTTATAAAAAGTAGTTGTAGCAGTGAAACTGGCAACTATTCTGTGTATACACCATCTGAGCCTGGTGGACTAGGTAACTCAAGGTCATGGTTTACTTATGAGGAGCTAGTTAAAGCAACAAATGGCTTTTCAAACCAAAATCTTTTGGGTGAGGGTGGATTTGGTTCTGTATATAAAGGATGTCTGCCTGATGGGAGAGAGATAGCAGTAAAACAGCTGAAAATTGGAGGAGGTCAGGGAGAAAGAGAGTTTAAAGCTGAGGTGGAGATTATTAGTCGCATACACCATCGACATTTGGTTTCTTTGGCGGGATACTGCATTTCAGATCAGAGAAGGCTGCTTGTTTATGACTATGTCCCTAACAATACCCTTTATTTCCATCTTCATGGGCAAGAAAAGCGAGTAATGGACTGGGAAAAGCGTGTTAGAATTGCTGCTGGTGCTGCTCGAGGAATAGCTTATCTCCACGAAGACTGCAATCCTCGAATTATTCACAGGGATATAAAGTCATCTAACATTCTTTTAGAttacaactttgaagctcgaGTCTCAGACTTTGGACTAGCCAAATTAGCTCTTGATTCAAATACTCATGTAACCACACGTGTAATGGGAACTTTTGGATATGTTGCCCCTGAATATGCATCGAGTGGCAAATTGACAGAGAAGTCtgatgtattttcttttggagtcGTTCTATTGGAGCTAATTACTGGAAGGAAGCCAGTAGATGAATCTCAACCCTTAGGAGATGAGAGTCTTGTTGAATGGGCTCGACCTTTACTTAGCGATGCGCTTGATAATCAGGAATTTGACAGTTTTACAGATCCAGGGCTAGAAAACAATTATGTTGACAGTGAAATGTTTCGAATGATTGAAGTTGCTGCTGCTTGTGTGCGGCATTCAGCTGCCAAGAGGCCTAGCATGGCGCAGGTTGTTAGAGCTTTTGATAGCTTAGCTGCTTCAGATCTAACCAATGGAATGAGGCCAGGGCAAAGTGAGGTAATTGACTCTGCACTGCAATCTGCAGAAATAAGATGGTTTCAGAGTATAGCATTTGGTAGCCAAGATTATGGCACAGACAATTTTAGCCACACAAGTCTGAATACTTA 2177 0.4685 MSVTLPSPASTAAASPQTPLGSKAPPPSPSTTTPPPQASSPPPDNSTSPPSQPNADPVAPPTASPPAPPPATPSAPPPAVPSSPPSQPPLASPPPPPSGTPPPPLTPSVAPPPATPSAPPPAVPSSPPSQPPLASAPPPPPPINSPVPPPLPSPPPPPPAHDSPPPPASSPPENSPPPQIALPAPRNSPPPRNSPPPPVAEPPRNSSPPQASAPSPLSPPRPASRPPSSSPPPPRTTPPTPSPSNSTSKSSPPPPGIQLAPPPPPPVSAGPSQAPTPPSINGEETSNSRGIGIGGIVAIAVVAGILAFAFIGFAIWCMRRQKKKPPGNGRYVMPSALPSSPESDSSFFKTHSSAPLIKSSCSSETGNYSVYTPSEPGGLGNSRSWFTYEELVKATNGFSNQNLLGEGGFGSVYKGCLPDGREIAVKQLKIGGGQGEREFKAEVEIISRIHHRHLVSLAGYCISDQRRLLVYDYVPNNTLYFHLHGQEKRVMDWEKRVRIAAGAARGIAYLHEDCNPRIIHRDIKSSNILLDYNFEARVSDFGLAKLALDSNTHVTTRVMGTFGYVAPEYASSGKLTEKSDVFSFGVVLLELITGRKPVDESQPLGDESLVEWARPLLSDALDNQEFDSFTDPGLENNYVDSEMFRMIEVAAACVRHSAAKRPSMAQVVRAFDSLAASDLTNGMRPGQSEVIDSALQSAEIRWFQSIAFGSQDYGTDNFSHTSLNT 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00837 725 SMART serkin_6 398 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00837 725 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 118 720 - -
Bva11g00837 725 Gene3D Phosphorylase Kinase; domain 1 374 473 - -
Bva11g00837 725 ProSiteProfiles Protein kinase domain profile. 398 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00837 725 MobiDBLite consensus disorder prediction 20 273 - -
Bva11g00837 725 MobiDBLite consensus disorder prediction 1 18 - -
Bva11g00837 725 Gene3D Transferase(Phosphotransferase) domain 1 474 688 - -
Bva11g00837 725 MobiDBLite consensus disorder prediction 1 287 - -
Bva11g00837 725 Pfam Protein tyrosine and serine/threonine kinase 401 670 IPR001245 GO:0004672|GO:0006468
Bva11g00837 725 ProSitePatterns Protein kinases ATP-binding region signature. 404 426 IPR017441 GO:0005524
Bva11g00837 725 PANTHER BNACNNG34790D PROTEIN 118 720 - -
Bva11g00837 725 SUPERFAMILY Protein kinase-like (PK-like) 379 669 IPR011009 -
Bva11g00837 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 518 530 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00837 Bva-Chr11 10926530 10930891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00837 137 712 Trihelix Transcription Factor Family AT1G70460 47.324 7.77e-160 477
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bva11g00837 PK_Tyr_Ser-Thr 3.6e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00837 11 10926530 10930891 Bva11g00837 11 10926530 10930891 ECH