Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00834 ATGACAAAACTCGAAACCGATCAGGTGAAGCAGCTCAGAGACATATTCGCACGCTTTGACATGGACTCCGACGGCAGCCTGACCCACCTAGAGCTCTCCGCCCTCCTCCGGTCCCTCGGCATCAAACCGGCGAACGGCGATGAGCTCTACGCCCTGCTCACCAACATGGACGAGAATGGCAATGGCTACATTGAGTTTGAGGAGCTCATGCATGCCATTTTGCCTGACATGAATGAAGAGGTGCTCATCAACCAGGAACAGCTCTTGGAGGTATTCAGGTCCTTCGACAGGGATGGCAACGGCTACATCACCGCCTCCGAGCTCGCCGGCTCCATGGCCAGGATGGGTCATCCCTTGACCTACCGGGAACTCGCCGATATGATGAGAGAGGCTGATAGCAATGGCGATGGTGTTATAAGCTTCAATGAGTTTACAAACATGATGGCTAAGTCTGCTGCTGATTTTCTTGGCGTCAAGCTTGCTTA 485 0.534 MTKLETDQVKQLRDIFARFDMDSDGSLTHLELSALLRSLGIKPANGDELYALLTNMDENGNGYIEFEELMHAILPDMNEEVLINQEQLLEVFRSFDRDGNGYITASELAGSMARMGHPLTYRELADMMREADSNGDGVISFNEFTNMMAKSAADFLGVKLA 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00834 161 ProSitePatterns EF-hand calcium-binding domain. 96 108 IPR018247 -
Bva11g00834 161 ProSiteProfiles EF-hand calcium-binding domain profile. 83 118 IPR002048 GO:0005509
Bva11g00834 161 ProSitePatterns EF-hand calcium-binding domain. 57 69 IPR018247 -
Bva11g00834 161 CDD EFh 87 149 IPR002048 GO:0005509
Bva11g00834 161 Gene3D - 105 156 - -
Bva11g00834 161 SUPERFAMILY EF-hand 2 149 IPR011992 -
Bva11g00834 161 Gene3D - 1 104 - -
Bva11g00834 161 PANTHER BNACNNG21080D PROTEIN 5 159 - -
Bva11g00834 161 ProSiteProfiles EF-hand calcium-binding domain profile. 44 79 IPR002048 GO:0005509
Bva11g00834 161 ProSiteProfiles EF-hand calcium-binding domain profile. 7 42 IPR002048 GO:0005509
Bva11g00834 161 ProSitePatterns EF-hand calcium-binding domain. 20 32 IPR018247 -
Bva11g00834 161 ProSitePatterns EF-hand calcium-binding domain. 132 144 IPR018247 -
Bva11g00834 161 SMART efh_1 123 151 IPR002048 GO:0005509
Bva11g00834 161 SMART efh_1 87 115 IPR002048 GO:0005509
Bva11g00834 161 SMART efh_1 48 76 IPR002048 GO:0005509
Bva11g00834 161 SMART efh_1 11 39 IPR002048 GO:0005509
Bva11g00834 161 PANTHER CALCIUM BINDING PROTEIN 5 159 - -
Bva11g00834 161 ProSiteProfiles EF-hand calcium-binding domain profile. 119 154 IPR002048 GO:0005509
Bva11g00834 161 Pfam EF-hand domain pair 10 73 IPR002048 GO:0005509
Bva11g00834 161 Pfam EF-hand domain pair 86 148 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00834 Bva-Chr11 10923528 10924349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00834 6 158 EF-hand Containing Proteins AT3G25600 79.085 1.57e-87 251
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00834 11 10923528 10924349 Bva11g00834 11 10923528 10924349 ECH