Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00827 ATGTTTGACATGATGCCCCCTGAGCAAGAAACCACTATCACCACCACTGTTACATCAAACATTCCGGTCACCAACCGGCCGGAAAACAGCTTGGTTTACGCTGAGCCACCGGGTTCCACCTCGAGTGAAGTAAAATCCAGTTTGGATAATGGCATTCCCCTACCACAACAGCCAACAGCAGCAAgattttccaattttcttcAACAGTCCTTGAAGCAAATTACCCTCAGGTTTGAGGACGTTTGTTATAGTATAACATTACAAAGTAAACAGAACGGTGGCTGTTCATCTTCTCAAGAGCCAAAGCTTACCCGGAATATACTCAACGGGGTGACGGGGATTGTCCGGCCCGGCGAGTTGATGGCAATGCTAGGACCCTCCGGCAGCGGCAAGACCACGTTACTCACCGCCCTGGCGGGCCGCCTTGCCGGAAAAGTGTCCGGTACCATAACATACGATGGCCAACCTTTCTCTAGCTCCATGAAGCGCAAGATTGGTTTTGTGCCACAAGATGATGTCTTTTATCCTCGCCTCACTGTTCTCGAGACTCTAACTTATGCTGCTTTTTTGAGGCTACCCAAAACTCTCACTTCACAAGAGAAACTGGAGCAAGTTGAGATGATCATTGTGGAGCTTGGCTTAACACGCTGCCGGAACAATGCTGTTGGTAGCGGCGCAGCTTTATTTCGGGGCATTTCCGGTGGGGAGCGAAAACGGGTCAGTATCGGGCAGGAGATGTTGGTGAACCCGAGTCTCTTGTTGCTGGATGAACCAACCTCCGGCCTCGACTCAACAACTGCGCAACGTATCGTGTCAATGCTACGGGGGCTCGCCCGTGGTGGCCGGACGGTGGTGACCACCATACATCAGCCTTCTAGCCGGTTGTATAGGATGTTTGATAAGGTGGTGGTGTTATCTGATGGGTACCCATTTTACAGTGGGCAAGCGGGTCGGGTCATGGAGTATCTCGGATCCATAGGATATGTGCCTGCATTCAATTTCATGAACCCGGCAGATTTTCTCCTTGACCTTGCTAATGGCATAGTAGCTGATGCTAAACAGGATGATCATAACGGATTTGACCATCATGAGGATCAAGCTTCAATCAAACAATCCCTTGTGTCATCCTACAAAAAGAACTTATATCCTGCCCTGAAAGAAGAGGTTCAGAGAAATAATGGGGACCCATCTGTTTATAGATCAAGGACACCCAGAAGTCCAGAGAACCAATGGACCACAAGCTGGTGGGAACAATTCAAGGTTCTGCTGAAAAGGGGTTTACAGGAGAGGAGACATGAATCTTATTCAGGCTTAAGGATTTTCCAAGTCTTGTCTGTTTCAATTCTCTCAGGACTTCTATGGTGGAATTCTGATCCTTCCCACATACAAGATCAGGTTggccttcttttcttcttcgcCATATTCTGGggattttttcctttgttcaaTGCTGTCTTCGCGTTTCCTCTGGAGCGGCCAATGCTGAAAAAAGAGCGATCGTCAGGCATGTACCATCTCTCCTCCTACTACGTTGCCCGGACGGTTGGAGATTTACCAATGGAGCTAATCCTTCCTACAATCTTTGTCACAATCACTTACTGGATGGGTGGCCTCAAGCCTTCACTTGTTACATTTTCCCTAACCCTCTTGATCATCCTTTTTAATGTACTTGTGTCCCAAGGAATAGGCCTAGCACTTGGTGCAATCCTAATGGATGTGAAGCAAGCCACAACTCTAGCTTCAGTAACCATGCTGGTTTTTCTCTTAGCTGGTGGTTACTACATTCAGCAAATGCCAGCATTCATAGCTTGGTTGAAGTACATTTCTTTCAGCCACTACTGCTATAAGCTTCTGGTTGGGGTGCAGTATTCAGTGAATGAGGTTTATGAATGTGGATTAGGGTTACACTGTAGGGTGATGGATTTTCATGCTTTGAAGTATCTGGGGTTAAATAATTTGTGGGGAGATGTGGCTGCATTGACTGTGATGTTAATAGGATGCAGAATTGTGGCCTATGTGGCTTTGAGGATGGGGCAGCCTCACTG 2045 0.4631 MFDMMPPEQETTITTTVTSNIPVTNRPENSLVYAEPPGSTSSEVKSSLDNGIPLPQQPTAARFSNFLQQSLKQITLRFEDVCYSITLQSKQNGGCSSSQEPKLTRNILNGVTGIVRPGELMAMLGPSGSGKTTLLTALAGRLAGKVSGTITYDGQPFSSSMKRKIGFVPQDDVFYPRLTVLETLTYAAFLRLPKTLTSQEKLEQVEMIIVELGLTRCRNNAVGSGAALFRGISGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAQRIVSMLRGLARGGRTVVTTIHQPSSRLYRMFDKVVVLSDGYPFYSGQAGRVMEYLGSIGYVPAFNFMNPADFLLDLANGIVADAKQDDHNGFDHHEDQASIKQSLVSSYKKNLYPALKEEVQRNNGDPSVYRSRTPRSPENQWTTSWWEQFKVLLKRGLQERRHESYSGLRIFQVLSVSILSGLLWWNSDPSHIQDQVGLLFFFAIFWGFFPLFNAVFAFPLERPMLKKERSSGMYHLSSYYVARTVGDLPMELILPTIFVTITYWMGGLKPSLVTFSLTLLIILFNVLVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQQMPAFIAWLKYISFSHYCYKLLVGVQYSVNEVYECGLGLHCRVMDFHALKYLGLNNLWGDVAALTVMLIGCRIVAYVALRMGQPH 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00827 681 SMART AAA_5 117 310 IPR003593 -
Bva11g00827 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 105 325 IPR027417 -
Bva11g00827 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 53 678 - -
Bva11g00827 681 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 76 332 IPR003439 GO:0005524
Bva11g00827 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 53 678 - -
Bva11g00827 681 Pfam ABC-2 type transporter 417 623 IPR013525 GO:0016020|GO:0140359
Bva11g00827 681 Pfam ABC transporter 108 260 IPR003439 GO:0005524
Bva11g00827 681 Gene3D - 95 326 IPR027417 -
Bva11g00827 681 ProSitePatterns ABC transporters family signature. 232 246 IPR017871 GO:0005524
Bva11g00827 681 Pfam ABC-2 type transporter 289 355 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00827 Bva-Chr11 10862752 10866927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00827 106 308 Calmodulin-binding Proteins AT2G36910 30.047 8.53e-13 70.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00827 11 10862752 10866927 Bva11g00827 11 10862752 10866927 ECH