Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00826 ATGACGGACACCACAGACGACATAGGCATACCTGAAGAAATCTCTTTCCAGGGCTTCGTTGATGACTGTAAATTGCTCGGCAATCTTCTCGTTGATGTTTTGCATCGAGAGGTTGGAAGTAACTTCGTAGCTAAGCTCGAAAGGACCCGAATTCTTGCTGAGAGTGCTTGCAATATGAGGCAAGCAGGGATCGAGGAAACGGCAGAGTTGCTTGAGAAGCAGTTGGCTTCTGAGATATCGAATATGACACTAGAAGAAGCCTTGATCATCAGTCGTGCCTTTAGCCATTATCTTAATTTGATGGGCATAGCTGAAACTCATCATAGGGTTCGTAAAGGAAGGAATATGGCACACTTATCAAAATCTTGTGATGACACTTTTAACCAGCTTGTGCAGGGTGGACTTTCCCCAGATGAGCTTTATAAGACAGTGTGCAAACAGGAGGTCGAAATTGTTCTTACAGCTCATCCAACACAAATTAATCGCCGTACCTTACAGTACAAACACATTAGAATTGCTCATCTTTTAGAGTATAATGATCGACCTGATCTTGGCCttgaagataaagaaatgGTGATTGAAGATCTGGTGAGAGAGATAACTTCAATATGGCAGACAGATGAGCTTAGGCGTCATAAACCCACACCAGTTGATGAAGCCAGGGCTGGTTTAAATATTGTGGAGCAGTCACTCTGGAAAGCTGTCCCTCATTATTTACGTCGAGTCAGCAATTCTTTGAAGAAGCATACAGGGAAGCCACTTCCATTAACTTGCACTCCTATTAGATTTGGATCTTGGATGGGAGGTGATAGAGATGGAAACCCAAACGTGACAgcaaagGTCACAAAAAATGTCTCACTTTTATCTAGATGGATGGCTATTGATCTCTATGTTCGAGAAGTTGATAGCCTCAGATTTGAGCTATCTATGAACCGGTGTGATGATAGGTTGTCAAGATTGGCACATGAAATTCTAGAAGaagAAGCTTTGTCTGAGGACCGCCAACATCATGAGAGTTGGAATCAGTCTTCGGGTCGAAGTCAGTTGAAACACCATGGTCAACAAGCTTCTGCACTTCCAACACAACTTCCAGCTAGAGCTCATTTGCCGTCTCTTGCTGaAAACGGCGAGTCTGAATATCCCAGGCTAGACATTCCTACAGCCGATCTCAATCCACCCAATCCAAAGGATGGTGCAAGTTCTTCAAGTTCAACTACATCTATGAGTCACGATGAAAAATTGAGTGTATCAGTGACAAGTTCAGCAAATAATAGTGCTTCTCTGTCAGCCGCAGCTTTACGTTCTCCTCCTTCTTTCAACTCTAGTCAATTACTTGCTCAGAGGAAAATGTTTGCAGAATCCCAGATAGGAAAGTCCAGTTTCCATAAGCTTTTGGAGCCACAGCTCCCTGAGCGTCCAGGAATGGCTCCTTATAGAATAGTCCTTGGCAATGTAAAAGATAAGCTTCTAAAAACTCGGAGACGGTTGGAGCTTCTTCTTGAGGATCTTCCATGTGAATATGATCCTTTGGATTACTATGAAACAGCTGATCAACTTTTGGAACCTCTGCTTTTCTGTTATGAATCTCTGCAATCATGTGGCGCTGGGGTGCTAGCTGATGGTAAACTGGCAGACCTGATACGAAGAGTTGCTACTTTTGGAATGGTGTTGATGAAGCTTGATTTACGTCAGGAATCGGCTAGACATGCTGAAACACTTGATGCAATCACAAGATATCTGGATATGGGGACTTACAGTCAAtgggatgaagaaaagaaactggACTTCTTAACAAGAGAGCTCAAAGGGAAGAGGCCACTTGTTCCTCCTAGTATTGAGGTTGCTCCTGATGTTAAAGAAGTCCTGGATACCTTCCGCGTTGCCGCTGAGCTGGGGAGTGATTCACTTGGGGCCTATGTCATCTCTATGGCTGCAAATGCGAGTGATGTCCTTGCAGTGGAGCTTTTACAGAAAGATGCACGTCTTGCTGTTAGTGGGGAGTTGGGAAGAGCTTGTCCTGGTGGAACGCTGCGGGTAGTTCCTCTATTTGAAACTGTAAAGGACCTCAGAGCAGCTGGTTCAGTTATCCGAAAGCTTTTGTCAATTGATTGGTACCGTGAACACATCATTAAGAACCACAATGGACATCAAGAGGTTATGGTGGGATATTCTGATTCTGGGAAAGATGCTGGGCGCTTTACTGCTGCTTGGGAACTTTACAAAGCTCAGGAGGATGTTGTGGCTGCTTGTAACGAGTATGGTATCAAGGTTACTCTGTTCCATGGCCGTGGAGGGAGTATTGGTCGTGGTGGTGGCCCTACATATCTGGCTATTCAGTCCCAGCCTCCTGGTTCCGTGATGGGAACCCTTCGGTCAACTGAGCAGGGAGAGATGGTACAGGCCAAGTTTGGGTTGCCACAGACAGCTGTTAGACAACTAGAAATATACACAACGGCTGTGCTACTTGCAACTCTTCATCCACCTCATCCGCCCCGAGAAGAAAAATGGCGTAATCTCATGGAAGAAATCTCAAAAGTTAGTTGCCAGTGTTACCGCAGCGTAGTCTATGAAAACCCAGAGTTCATTTCCTACTTCAATGAAGCCACACCTCAAGCAGAGCTTGGCTTCCTCAACATAGGTAGCCGCCCCACGAGAAGAAAGAGCTCAACAGCAATTGGACATCTTCGTGCCATACCCTGGATATTTGCATGGACTCAAACCAGATTTGTTCTTCCAGCTTGGCTTGGAGTTGGAGCAGGTTTAAAAGGTGCTTGCGAGAAAGGACACACAGAAGAGCTAAAAGCAATGTACAAAGACTGGCCGTTCTTTCGATCTACAATAGACCTTATTGAGATGGTTCTGGGGAAGGCAGACATTCCCATAGCCAAGCATTATGATGAAGTCCTTGTGTCAAAGAGTAGGCAAGAGCTTGGTGCTGAACTAAGAAAGGAGCTCATAGCAGCAGGGAAGTTTGTACTGATAATTAGTGGGCACGAGAAACTTCAGGAGAACAATAGGAGCTTACGGAGGCTAGTTGAGAATCGACTTCCCTATCTGAATCCCATAAACATGATGCAGGTGGAGATATTGAAGAGGTTGCGAGGTGACGATGACAACCATAAACTGAGAGATGCTTTGCTTATCACCATCAATGGCATTGCTGCTGGGATGAGGAATACTGGTTG 3185 0.4443 MTDTTDDIGIPEEISFQGFVDDCKLLGNLLVDVLHREVGSNFVAKLERTRILAESACNMRQAGIEETAELLEKQLASEISNMTLEEALIISRAFSHYLNLMGIAETHHRVRKGRNMAHLSKSCDDTFNQLVQGGLSPDELYKTVCKQEVEIVLTAHPTQINRRTLQYKHIRIAHLLEYNDRPDLGLEDKEMVIEDLVREITSIWQTDELRRHKPTPVDEARAGLNIVEQSLWKAVPHYLRRVSNSLKKHTGKPLPLTCTPIRFGSWMGGDRDGNPNVTAKVTKNVSLLSRWMAIDLYVREVDSLRFELSMNRCDDRLSRLAHEILEEEALSEDRQHHESWNQSSGRSQLKHHGQQASALPTQLPARAHLPSLAENGESEYPRLDIPTADLNPPNPKDGASSSSSTTSMSHDEKLSVSVTSSANNSASLSAAALRSPPSFNSSQLLAQRKMFAESQIGKSSFHKLLEPQLPERPGMAPYRIVLGNVKDKLLKTRRRLELLLEDLPCEYDPLDYYETADQLLEPLLFCYESLQSCGAGVLADGKLADLIRRVATFGMVLMKLDLRQESARHAETLDAITRYLDMGTYSQWDEEKKLDFLTRELKGKRPLVPPSIEVAPDVKEVLDTFRVAAELGSDSLGAYVISMAANASDVLAVELLQKDARLAVSGELGRACPGGTLRVVPLFETVKDLRAAGSVIRKLLSIDWYREHIIKNHNGHQEVMVGYSDSGKDAGRFTAAWELYKAQEDVVAACNEYGIKVTLFHGRGGSIGRGGGPTYLAIQSQPPGSVMGTLRSTEQGEMVQAKFGLPQTAVRQLEIYTTAVLLATLHPPHPPREEKWRNLMEEISKVSCQCYRSVVYENPEFISYFNEATPQAELGFLNIGSRPTRRKSSTAIGHLRAIPWIFAWTQTRFVLPAWLGVGAGLKGACEKGHTEELKAMYKDWPFFRSTIDLIEMVLGKADIPIAKHYDEVLVSKSRQELGAELRKELIAAGKFVLIISGHEKLQENNRSLRRLVENRLPYLNPINMMQVEILKRLRGDDDNHKLRDALLITINGIAAGMRNTG 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00826 1061 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 19 1061 IPR015813 GO:0003824
Bva11g00826 1061 MobiDBLite consensus disorder prediction 376 418 - -
Bva11g00826 1061 Gene3D Phosphoenolpyruvate/pyruvate domain 291 375 - -
Bva11g00826 1061 Gene3D Phosphoenolpyruvate/pyruvate domain 407 555 - -
Bva11g00826 1061 Pfam Phosphoenolpyruvate carboxylase 22 327 IPR021135 GO:0006099|GO:0008964|GO:0015977
Bva11g00826 1061 Pfam Phosphoenolpyruvate carboxylase 463 1061 IPR021135 GO:0006099|GO:0008964|GO:0015977
Bva11g00826 1061 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 719 731 IPR033129 -
Bva11g00826 1061 MobiDBLite consensus disorder prediction 330 358 - -
Bva11g00826 1061 MobiDBLite consensus disorder prediction 394 418 - -
Bva11g00826 1061 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 4 12 1061 - -
Bva11g00826 1061 PRINTS Phosphoenolpyruvate carboxylase signature 151 164 IPR021135 GO:0006099|GO:0008964|GO:0015977
Bva11g00826 1061 PRINTS Phosphoenolpyruvate carboxylase signature 263 278 IPR021135 GO:0006099|GO:0008964|GO:0015977
Bva11g00826 1061 PRINTS Phosphoenolpyruvate carboxylase signature 204 220 IPR021135 GO:0006099|GO:0008964|GO:0015977
Bva11g00826 1061 MobiDBLite consensus disorder prediction 341 358 - -
Bva11g00826 1061 Hamap Phosphoenolpyruvate carboxylase [ppc]. 11 1061 IPR022805 GO:0006099|GO:0008964|GO:0015977
Bva11g00826 1061 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 12 1061 IPR021135 GO:0006099|GO:0008964|GO:0015977
Bva11g00826 1061 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 152 163 IPR018129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00826 Bva-Chr11 10838162 10848208 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00826 11 10838162 10848208 Bva11g00826 11 10838162 10848208 ECH