Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00820 ATGGCCTCAGTCTCAGATACTGCTTCTAGATCAACAAGTTCAGCTGCCGATTCTTACATAGGCAGCTTAATAAGCTTGACTTCCAAGAGCGAGATCAGATATGAAGGTGTTCTATACAACATCAACACTGAAGAGTCCAGTATTGGCCTCCGAAACGTACGATCTTTTGGaacagaaggaagaaaaaaggatgGGCCACAAATTCCTCCAGGTGACAAGGTGTATGAGTATATACTGTTCCGAGGGAGTGACATCAAGGATTTACAGGTTAAATCTTCTCCACCTGTCCAGCCCACTCCACCAATAAACAATGATCCTGCAATTATTCAGTCACACTATCCTCGGCCAGTAACCACATCTACCAGCTTGCCTTCTTCCGTAAGTGGTCCATTGACTGATCTCAGTTCCCATACCCCACAACTTGGAATGCCAGGGTCAAATTTTCAGGGAACCTTGCCTTTGTATCAACCTGGAGGAAACATAGGGTCATGGGGACCTTCTCCACCTGTTCCAAGTGCAAATGGTGGTGGGCTAGCTATGCCAATGTATTGGCAAGGATATTATGGTGCTCCAAATGGGCTTCCACATCTACACCAGCAATCTTTGCTTCGTCCCCCACCTGGCTTATCAATGCCTTCATCTATGCAGCAGCCAATGCAATATCCCAATTTTAATCCCTCATTACCAGCTGGATCTGTAAATTTGCCAGAATTCTCATCACCTTTGGTCCCTGCTAGTAGTAGTTTGCCTAGCTTAACATCCACTTCTTTACCACCTTCTAACTTGCCATTGACATTGCCTCCAGCACCTTCTGCTACCTTGGCTTCTGAAACTTTGCCAGCATCAGTATCAAGCAAGGCACCAACCATTTCACTTCCAGCACCCATCCTGGGTGCTAACTTGCCATCCCTCTCCCCTTTGACCACTTCCAGTGACACTAATGCTGTATTACCTCCAATCCCCAATAAGCCTAATGTTATCCCAGCTTCAAGCTTGCCTTTTCAAACTGTATCTCAGCCAGCACCTGCTGTCATTGGGTCATCAAATTCTACCCGCAATGAAACACCAGCTCCTTCTCTGGTAACCCCAGGTCAGTTGCTGCAGTCTGGACCCGGTATTGCTTCTTCATCTCAGCCTTCACAGAAGCCCTCTCATAAAGATGTTGAAGTGGTTCAGGTATCATCATCAACATCACCTGAACCATCTGTTCCAGTTTCAGCTGAAGCCCAACCTCCTATCTTGCCATTGCCTGTTACTTCATGGCCCAGTCACAGgTCTAATGGAGCTTCAGTCCAAACTCATCATGGTTATGGTTACCGAGGTCGTGGAAGAGGTCGAGGGATTGCgAGTTCACGCCCGGTCACGAAATTCACTGAAGATTTTGATTTCACGGCGATGaatgagaaatttaataaGGATGAAGTATGGGGCCATCTGGGTAAAAGTAACAAGTCTcattcaaaagagaaagatgggGATGAAAATGTTAGTGATGAAGATGATATTCAAGAAGATGAAGACAATGGTGAAGTATCGAAGTTTGAGGTCAAGCATGTCTATAAAAAGGATGATTTCTTCGATACCCTCTCTTGCAATGCATTTGATAGTGATCCACAGAATGGAAGGACTAGATACTCCGAGCAAATTAAGATAGATACAGAGACATTTGGTGATTTTACGAGGTATCGTGGCGGTCGGGGTGGCCGTGGTCCTGGGCGTGGTGGACGTTCTCGAGGTGGTTATTATGGAAGGGGATATGGATATGGCTACACTGGAAGGGGGCGAGGTCGGGGCATGTCCGGTCGCATTTCATA 1814 0.4504 MASVSDTASRSTSSAADSYIGSLISLTSKSEIRYEGVLYNINTEESSIGLRNVRSFGTEGRKKDGPQIPPGDKVYEYILFRGSDIKDLQVKSSPPVQPTPPINNDPAIIQSHYPRPVTTSTSLPSSVSGPLTDLSSHTPQLGMPGSNFQGTLPLYQPGGNIGSWGPSPPVPSANGGGLAMPMYWQGYYGAPNGLPHLHQQSLLRPPPGLSMPSSMQQPMQYPNFNPSLPAGSVNLPEFSSPLVPASSSLPSLTSTSLPPSNLPLTLPPAPSATLASETLPASVSSKAPTISLPAPILGANLPSLSPLTTSSDTNAVLPPIPNKPNVIPASSLPFQTVSQPAPAVIGSSNSTRNETPAPSLVTPGQLLQSGPGIASSSQPSQKPSHKDVEVVQVSSSTSPEPSVPVSAEAQPPILPLPVTSWPSHRSNGASVQTHHGYGYRGRGRGRGIASSRPVTKFTEDFDFTAMNEKFNKDEVWGHLGKSNKSHSKEKDGDENVSDEDDIQEDEDNGEVSKFEVKHVYKKDDFFDTLSCNAFDSDPQNGRTRYSEQIKIDTETFGDFTRYRGGRGGRGPGRGGRSRGGYYGRGYGYGYTGRGRGRGMSGRIS 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00820 604 MobiDBLite consensus disorder prediction 113 154 - -
Bva11g00820 604 MobiDBLite consensus disorder prediction 244 264 - -
Bva11g00820 604 SMART LSM14_2 13 113 IPR025609 -
Bva11g00820 604 ProSiteProfiles DFDF domain profile. 449 485 IPR025762 -
Bva11g00820 604 MobiDBLite consensus disorder prediction 341 404 - -
Bva11g00820 604 MobiDBLite consensus disorder prediction 494 508 - -
Bva11g00820 604 CDD LSm14_N 16 90 IPR025609 -
Bva11g00820 604 Pfam FDF domain 456 557 IPR019050 -
Bva11g00820 604 MobiDBLite consensus disorder prediction 341 450 - -
Bva11g00820 604 SUPERFAMILY Sm-like ribonucleoproteins 18 95 IPR010920 -
Bva11g00820 604 MobiDBLite consensus disorder prediction 561 582 - -
Bva11g00820 604 MobiDBLite consensus disorder prediction 478 493 - -
Bva11g00820 604 ProSiteProfiles FFD box profile. 518 533 IPR025761 -
Bva11g00820 604 MobiDBLite consensus disorder prediction 109 154 - -
Bva11g00820 604 MobiDBLite consensus disorder prediction 478 510 - -
Bva11g00820 604 Pfam Scd6-like Sm domain 19 92 IPR025609 -
Bva11g00820 604 SMART FDF_2 455 560 IPR019050 -
Bva11g00820 604 MobiDBLite consensus disorder prediction 244 260 - -
Bva11g00820 604 PANTHER SCD6 PROTEIN-RELATED 1 595 - -
Bva11g00820 604 PANTHER PROTEIN DECAPPING 5-LIKE 1 595 - -
Bva11g00820 604 Gene3D - 10 95 - -
Bva11g00820 604 ProSiteProfiles TFG box profile. 540 560 IPR025768 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00820 Bva-Chr11 10802666 10807189 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00820 11 10802666 10807189 Bva11g00820 11 10802666 10807189 ECH