Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00811 ATGGCGTCACTGTCCTcgctctctctctatttcttcctctttctcttcacCAGCACACGCTCGAGCAACGCCAACATTGCCAACAAAGACTACCTTAAGTTCCCATTGCTCCACAAGAACCCATTATCGTCCCCTGCTAAGCTTCTCTCCTCCGACGCCCACCGCCTCTCGGTCCTCTTCTCCACCCTTCACGGCCACCGGACCGTCAAATCTCCTCTCATTTCCGGCGCCTCCACTGGCTCGGGTCAGTATTTCGTGGATCTCCGACTCGGATCACCGCCGCAGAGCCTCCTCCTCGTTGCCGATACCGGGAGTGATCTCGTCTGGATCAAGTGCTCCACCTGCAAAAACTGCTCTATCTACTCACCGGGATCGGCGTTCCTTGCTCGTCATTCATCCACATTCTCGCCACACCATTGCTACGACGCGCAGTGCCGTCTTGTCCCCCATCCGAGACCCGCCCCGAGATGCAATCGGACCAGGTTACACAGCCCCTGTCACTATGAATATTCTTACGCGGACGGGTCCATCACAAGTGGGTTCTTCTCGAAAGAAACAACTACGTTGAAAACAAGTTCCGGAAAAGAAGCTAAGCTGACAAATTTGGCGTTCGGATGCGGGTTTCGGACCTCCGGCCCGAGTGTTACGGGTGCGAGCTTCAATGGAGCTCAGGGGGTGATGGGTCTTGGTAGAGGATCCATTTCCTTCCCTTCCCAATTGGGTCGCCGATTCGGGAACAAGTTCTCTTACTGTCTACTCGACTACACTCTATCCCCGCCTCCAGCGAGCTACCTCACCATCGGAGCATTTCAAAACGACAACGTTTCCATTTCCATGGGTTTCAAAATCAGCTACACCCCGTTACTAACTAACCCTCTTTCCCCCACTTTCTACTACATTGATATCAAGAGCGTCTACGTGAGTGGAGCTAAATTACCAATCAACCCTTCTGTTTGGTCCATTGACGAGTCGGGTAACGGCGGCACTGTCATCGACTCTGGCACCACGTTAACCTTCTTGGCAGAACCTGCCTACCGTCAAGTTCTGGCGGCGTTTAGACGGCGGGTGAAGCTGCCGTTGGTAGAGGGGCCCACGCTGGGTTTCGACCTCTGCGTGAACGTTTCAGGCGCGTTGATAACGAGTTTTCCAAAACTGAGCTTCCGACTCGCCGGTAAATCAGCGTTGTTCTCGCCGCCGCCGAGGAACTACTTCATTGAAGCAGCGGATCGGGTCTTTTGCCTGGCGATCCAACCAGTGAAAGCGGGTTCCGGGTTTTCGGTGTTAGGGAATCTAATGCAACAAGGATATCTGTTGGAATTTGACAAGGAGAGGTCGCGGCTCGGGTTTTCACGCCACGGTTGCGCCTCGCCTTG 1373 0.5302 MASLSSLSLYFFLFLFTSTRSSNANIANKDYLKFPLLHKNPLSSPAKLLSSDAHRLSVLFSTLHGHRTVKSPLISGASTGSGQYFVDLRLGSPPQSLLLVADTGSDLVWIKCSTCKNCSIYSPGSAFLARHSSTFSPHHCYDAQCRLVPHPRPAPRCNRTRLHSPCHYEYSYADGSITSGFFSKETTTLKTSSGKEAKLTNLAFGCGFRTSGPSVTGASFNGAQGVMGLGRGSISFPSQLGRRFGNKFSYCLLDYTLSPPPASYLTIGAFQNDNVSISMGFKISYTPLLTNPLSPTFYYIDIKSVYVSGAKLPINPSVWSIDESGNGGTVIDSGTTLTFLAEPAYRQVLAAFRRRVKLPLVEGPTLGFDLCVNVSGALITSFPKLSFRLAGKSALFSPPPRNYFIEAADRVFCLAIQPVKAGSGFSVLGNLMQQGYLLEFDKERSRLGFSRHGCASP 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00811 457 Gene3D Acid Proteases 62 268 IPR021109 -
Bva11g00811 457 ProSiteProfiles Peptidase family A1 domain profile. 84 450 IPR033121 -
Bva11g00811 457 PANTHER BNAA02G27600D PROTEIN 12 456 - -
Bva11g00811 457 PRINTS Pepsin (A1) aspartic protease family signature 329 340 IPR001461 GO:0004190|GO:0006508
Bva11g00811 457 PRINTS Pepsin (A1) aspartic protease family signature 90 110 IPR001461 GO:0004190|GO:0006508
Bva11g00811 457 PRINTS Pepsin (A1) aspartic protease family signature 426 441 IPR001461 GO:0004190|GO:0006508
Bva11g00811 457 PANTHER OS07G0603500 PROTEIN-RELATED 12 456 - -
Bva11g00811 457 SUPERFAMILY Acid proteases 78 454 IPR021109 -
Bva11g00811 457 CDD pepsin_A_like_plant 83 454 IPR034161 -
Bva11g00811 457 Pfam Xylanase inhibitor N-terminal 84 268 IPR032861 -
Bva11g00811 457 Gene3D Acid Proteases 271 456 IPR021109 -
Bva11g00811 457 Pfam Xylanase inhibitor C-terminal 298 450 IPR032799 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00811 Bva-Chr11 10765466 10767015 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00811 46 454 Miscellaneous Gene Families AT1G77480 25.874 1.91e-25 106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00811 11 10765466 10767015 Bva11g00811 11 10765466 10767015 ECH