Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00810 atgaaaaaggaagaagatcaAGGACAGTGTTCTTCACAAGCCATCAATAACATTCAAAGCTATCAAGAGCAGCTACTTCTTCAGCAACAGATGCAGCAACACAACACTGATATCTATGGAGGTGGAAGAGGTTTGATGTTTCCAGCTGAGGTTTCTCCAGTCTTTCAGCCGCCATGGTCTCTCCCTCCGGTTCATTCTTTCAACCCGGCGGCGGCTGCTCACTTTGCAGCTGCCAACCCGGTCCGAGACCATGACCCATTTCTTGTCCCTCCCGCACCTTCATCATATGCAAGCCTATTCAATAGAAGGGTTAATGTTCCTTCTCTACAGTTTACTTACGAGGGTCCATCTTCAGACCATCTCCGGATCATATCTGATGCTCTTGGACCGGTGGTTCAACCCGGTTCAGCACCCTTTGGTCTCCAACCCGAATTAGGGAGAATGACTGCACAAGAAATCATGGATGCTAAGGCTCTTGCTGCATCTAAGAGTCATAGTGAAGCTGAAAGGAGACGCAGAGAGAGAATCAATAACCATCTCGCCAAGCTTCGCAGCTTATTGCCAAGTACAACCAAAACGGACAAAGCTTCATTGTTAGCAGAAGTGATTCAACATGTGAAGGAGCTGAAGCGTCAAACCTCATTGATAGCAGAAACAAGCCCAGTGCCTACTGAGATTGATGAGCTAACAGTGGATGCTGCTGATGAGGATGGCAAGTTTGTGATCAAAGCCTCACTTTGCTGTGAAGATAGGTCTGATCTCTTGCCTGACTTGATCAAAACCTTAAAAGCATTGAGATTGAGAACCCTTAAAGCCGAAATCACAACGCTCGGTGGGCGGATGAAGAATGTCTTGTTCATCACTGGGGAAGAAGATTCAAGTAGCAGTGAAGAACAGCAAAACCAGCAACAACAATATTGTATAAGCTCAATACAAGAAGCACTTAAGGCAGTGATGGAGAAGAGTGGTGGGGATGAATCTGCTTCGGGGAATGCTAAGAGGCAAAGGACTAATATCAATATCCTTGAACACAGGTCTTTATA 1043 0.4516 MKKEEDQGQCSSQAINNIQSYQEQLLLQQQMQQHNTDIYGGGRGLMFPAEVSPVFQPPWSLPPVHSFNPAAAAHFAAANPVRDHDPFLVPPAPSSYASLFNRRVNVPSLQFTYEGPSSDHLRIISDALGPVVQPGSAPFGLQPELGRMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPSTTKTDKASLLAEVIQHVKELKRQTSLIAETSPVPTEIDELTVDAADEDGKFVIKASLCCEDRSDLLPDLIKTLKALRLRTLKAEITTLGGRMKNVLFITGEEDSSSSEEQQNQQQQYCISSIQEALKAVMEKSGGDESASGNAKRQRTNINILEHRSL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00810 347 CDD bHLH_AtAIG1_like 155 233 - -
Bva11g00810 347 PANTHER TRANSCRIPTION FACTOR BHLH30 75 342 - -
Bva11g00810 347 Gene3D - 155 216 IPR036638 GO:0046983
Bva11g00810 347 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 164 216 IPR036638 GO:0046983
Bva11g00810 347 PANTHER TRANSCRIPTION FACTOR BHLH30 75 342 IPR045847 GO:0003700|GO:0006355
Bva11g00810 347 Pfam Helix-loop-helix DNA-binding domain 163 209 IPR011598 GO:0046983
Bva11g00810 347 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 160 209 IPR011598 GO:0046983
Bva11g00810 347 SMART finulus 166 215 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00810 Bva-Chr11 10751658 10754240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00810 11 345 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 57.143 6.16e-116 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva11g00810 HLH 1.7e-12 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00810 11 10751658 10754240 Bva11g00810 11 10751658 10754240 ECH