Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00805 ATGGCCACCGTTGCAGCTGGTGGAATCGGAGTAGGAGCAACAAAGCTCCAACCCCATAAATCCAAACACAAGTCTCTATTTCTCGGCCAGAGACTCAGAATCAAATCCTCGACTGAATCTCAGTGCAGTGGTAGAGTTAACACCATCTCAAAGCCCAAATCTTTCGTAGTTTTTGCTTTGGGGGGTGAATGGGTCGATCAAATTCACAACCTTTTTCTGGGTGTTGGGGTTGGGCTTCCCTGCACAGTGATGGAGTGTGGCGATATCATCTACAGAAGCACTCTTCCCAAATCTAATGGCTTGACACTCACAGCACCTGGGGCGGTTCTGGCTCTGAGCACTCTGTCCTACCTCTGGGCTACGCCTGGTGTGGCCCCTGGCTTCTTTGACATGTTTGTTCTTGCCTTTGTAGAAAGATTGTTCAGACCCTCTTATAAAAAGGATGATTTTATTCTGGGAAAGAAGATGGGGGAGGGATCATTTGGTGTTGTTTATAGAGTTTCTTTGGCCAAGAAGCCTGCTTCAAAGGAAGGTGACTTAGTGTTGAAGAAGGCAACCGAATATGGTGCTGTAGAAATTTGGATGAATGAACGTGTGCGAAGGGCTTGTGCAAGCAGCTGTGCTGATTTTGTTTATGGCTTTCTTGAGAGTTCTTCAAAGAAAGGTAGTGAATACTGGCTCCTATGGCGGTATGAAGGGGATAACACCCTAGCAGATTTGATGCAAAGTAAAGAATTTCCATACAATGTTGAGACAATCATTCTTGGTGACTCTGGTGAGGTCCAGGACTTGCCCAAGggaatagaaagagaaaatagaatCATTCAAACTATCATGAGACAGATCTTATTTGCATTAGATGGTCTTCACTCAACTGGCATTGTGCATAGGGATATTAAGCCACAGAACATTATTTTCTCAGAAGGTTCTCGTACATTCAAGATCATCGATCTCGGAGCTGCAGCAGATTTGCGAGTTGGAATCAACTATATTCCCAGTGAGTTTCTATTGGATCCAAGATATTCTGCGCCTGAGCAGTACATCATGAGCACACAAACTCCGTCTGCACCATCAGCTCCAGTTGCAACTGCACTTTCACCTGTATTATGGCAgTTGAACTTGCCGGAcagatttgatatatatagtgCTGGTctaatatttcttcaaatgGCATTTCCTGGATTGCGGACAGATAATGGCCTCATACAATTCAAACGTCAGTTAAAGAGGTGTGACTATGACTTGGTTGCTTGGAGGAAGAGCATAGAACCTCGTTGCGGCCCTGAACTCCGAAAGGGCTTTGAGCTGTTGGATTTAGATGGGGGAATAGGATGGGAACTCCTGACATCAATGGTGCGATACAAAGCACGACAAAGGCTCAGCGCAAAAGGAGCATTAGCTCATCCCTACTTCGACAAGGAAGGCCTGCTGGCATTGTCTTTCATGCAAAATCTGAGGCTGCAGATCTTGCGAGCAACGCAGCAGGATTATGGGGAAGCTGCCAACTGGATCCTTAGCCTAATGGCAAGATCTGGAACACAGCAGGCTGGTGGATTTACTGAAGCTCAGCTTCAGGAACTCAGAAAAATTGAACCCAAGAAGAAGGGTAATGCACAGAGAAATGCTCTAGCCTCGGCTCTTAGACTACAGAGGAAAATCATCAAAACCTTGAATGAGAGTATGGATGAGCTTACCCAGCGCAGAAAAAAGGTATGGTGGAGCAGATGGATACCCAGAGAGGAGTG 1745 0.4464 MATVAAGGIGVGATKLQPHKSKHKSLFLGQRLRIKSSTESQCSGRVNTISKPKSFVVFALGGEWVDQIHNLFLGVGVGLPCTVMECGDIIYRSTLPKSNGLTLTAPGAVLALSTLSYLWATPGVAPGFFDMFVLAFVERLFRPSYKKDDFILGKKMGEGSFGVVYRVSLAKKPASKEGDLVLKKATEYGAVEIWMNERVRRACASSCADFVYGFLESSSKKGSEYWLLWRYEGDNTLADLMQSKEFPYNVETIILGDSGEVQDLPKGIERENRIIQTIMRQILFALDGLHSTGIVHRDIKPQNIIFSEGSRTFKIIDLGAAADLRVGINYIPSEFLLDPRYSAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPGLRTDNGLIQFKRQLKRCDYDLVAWRKSIEPRCGPELRKGFELLDLDGGIGWELLTSMVRYKARQRLSAKGALAHPYFDKEGLLALSFMQNLRLQILRATQQDYGEAANWILSLMARSGTQQAGGFTEAQLQELRKIEPKKKGNAQRNALASALRLQRKIIKTLNESMDELTQRRKKVWWSRWIPREE 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00805 581 ProSiteProfiles Protein kinase domain profile. 150 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00805 581 CDD STKc_SNT7_plant 154 471 - -
Bva11g00805 581 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 17 581 IPR044803 GO:0004674|GO:0009579
Bva11g00805 581 Pfam Protein kinase domain 153 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00805 581 Gene3D Phosphorylase Kinase; domain 1 137 230 - -
Bva11g00805 581 SMART serkin_6 150 471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00805 581 PANTHER SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC 17 581 - -
Bva11g00805 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 294 306 IPR008271 GO:0004672|GO:0006468
Bva11g00805 581 SUPERFAMILY Protein kinase-like (PK-like) 136 473 IPR011009 -
Bva11g00805 581 Gene3D Transferase(Phosphotransferase) domain 1 262 476 - -
Bva11g00805 581 Coils Coil 547 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00805 Bva-Chr11 10711370 10715046 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00805 271 472 Core Cell Cycle Gene Families AT2G38620 30.047 2.23e-16 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Bva11g00805 Pkinase 4.3e-19 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00805 11 10711370 10715046 Bva11g00805 11 10711370 10715046 ECH