Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00797 ATGGATTTCACTGAGAAAATGCAGAGGCAGAAAATGGGATTCCGTGAGTACATCGAAGCTTTAGAAGTAGAACGCCGTAAAATTGAGGTGTTCCAGAGAGAGCTTCCACTTTGCTTGGAGCTTGTCACACAAGCCATTGAAGCGTGCAAGCAACAGCTATCAGGGACGACGACGGAGTGTAATTTGAATGGCCAATCGGAGTGTTCGGAGCAGACATCGACGGATGGTCCTGTTTTGGAGGAATTTATTCCTATAAAGAAAAGAGCTTCACCCGATtgtgatgaagatgatgaaaacGAGCAACATTCGCATAAGCCAAAGATCAGTAAGGATAAAAACactgataaaaagaaatcagatTGGCTTAGATCTGTTCAGCTATGGAACCCAGATCCTCCAGCTAAAGAGGATGTACCCAGAAAGGCTTCTGTTGTGGAAGTGAATAGAAATGGTGGAGCTTTTCAGCCGTTTCACAGAGAAGAAAGTGGTGGAAAGCCTAATGCGCCAGCTGCTAAAGCAGCAACACCCTCTTCGCCGCCGGTGCCAGCAACGAGTTCTACGGCGGGAGCAGCCACCGGAGATGATGGTGGAAGCAACAgaagagaggagaaagaaTCACAAGCTCACAGAAAGCAACGGCGGTGCTGGTCGCCGGAGCTGCATAAGCGCTTCTTGCATGCCTTGCAGCAACTTGGTGGTGCAGATTCTGCCACACCAAAGCAGATCAGGGAACTAATGAAAGTTGATGGCCTCACAAATGACGAAGTCAAAAGCCATTTACAGAAATTTCGTTTGCACACTAGAAGACCAACCTCAGTAATCCATAACAATGCCAACCCCCACCCGGCTCCTTTTGTACTTGTGGGGAACATTTTTGTTCAACCATCGGATTATGCTGGGGTAGCTACTTCAACCGTATCAGGGGAGGCGACCACGGTAGCTCCGCCAGGGATTTATGCTCCGGTCTCGGCGCATCCTCCCTCTGTCTCAGCTCCGTTTGTTCAGAAGTCACAGTTAAAGAAATTAGTAGAGCATTCTGAGCATTCAGAAGAAAGGACTAATAATAGTGAAGGAGCCGTTCACTCAAATTCACctgcttcatcatcttccaCCCATACAACCACAACTTCCCATGGCTATTG 1142 0.451 MDFTEKMQRQKMGFREYIEALEVERRKIEVFQRELPLCLELVTQAIEACKQQLSGTTTECNLNGQSECSEQTSTDGPVLEEFIPIKKRASPDCDEDDENEQHSHKPKISKDKNTDKKKSDWLRSVQLWNPDPPAKEDVPRKASVVEVNRNGGAFQPFHREESGGKPNAPAAKAATPSSPPVPATSSTAGAATGDDGGSNRREEKESQAHRKQRRCWSPELHKRFLHALQQLGGADSATPKQIRELMKVDGLTNDEVKSHLQKFRLHTRRPTSVIHNNANPHPAPFVLVGNIFVQPSDYAGVATSTVSGEATTVAPPGIYAPVSAHPPSVSAPFVQKSQLKKLVEHSEHSEERTNNSEGAVHSNSPASSSSTHTTTTSHGY 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00797 380 Pfam Myb-like DNA-binding domain 213 262 IPR001005 -
Bva11g00797 380 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 211 266 IPR006447 GO:0003677
Bva11g00797 380 MobiDBLite consensus disorder prediction 178 193 - -
Bva11g00797 380 Gene3D - 210 268 - -
Bva11g00797 380 MobiDBLite consensus disorder prediction 340 355 - -
Bva11g00797 380 SUPERFAMILY Homeodomain-like 209 269 IPR009057 -
Bva11g00797 380 MobiDBLite consensus disorder prediction 153 215 - -
Bva11g00797 380 MobiDBLite consensus disorder prediction 196 215 - -
Bva11g00797 380 MobiDBLite consensus disorder prediction 356 380 - -
Bva11g00797 380 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 268 IPR017930 -
Bva11g00797 380 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 376 IPR044787 GO:0003700|GO:0006355
Bva11g00797 380 MobiDBLite consensus disorder prediction 88 118 - -
Bva11g00797 380 MobiDBLite consensus disorder prediction 338 380 - -
Bva11g00797 380 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00797 Bva-Chr11 10662041 10664250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00797 1 324 G2-like Transcription Factor Family AT1G68670 51.183 6.78e-92 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva11g00797 Myb_DNA-binding 1e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00797 11 10662041 10664250 Bva11g00797 11 10662041 10664250 ECH