Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00789 ATGGCGGAATCTCCCTCTTTCTCGTCGTCTTCCTCCGATGTTGGTTCCATCGCCACTGCCGATCAGAATGCGGGTCGGAGTCGGGTAAGTGCTGACTCTACTCAAGTGGTGCCCACTGAGCAGTCTCGCCGCCGCTGGCATGACGTTTTCTGGTTAGGAATTTTTCTGATTCATTTGATTGGTCTAGGATTCCTTATGGGAGTACTGGGCCTCAATAGGTTTAAGAAGGAGAATAGGCTCAATATAGATAGGTATACGGCTGGGATTTCAGAGAATGAAGCCGGGTTGACCGAGGATTACTGGCCACTATATGCTGTTGCCGGTGGAGTTGGGACTCTTCTGGGATGGAGTTGGTTGTTATTGTTGGGTTCTCGTGCCAATCAAATGATGAAGCTCTTTGTGCACATTTTGACCACTTATCTCGCTGTGATCAGTGTTTTGTGTTTCTGGGTAGAACAGTTCTTCTGGGGAGTGGTCTTTGCCATTGGAGCAGCTTTGCAATTTTTGTATGTGATATCGGTCATAGACAGACTTCCATTTACCATGTTGGTTCTACAAAAAGCTGTGAAGATGGTGTGGAATCTCTCTGAGGTTATGAGAGTGGCATATGCATTTATGCTTGTTGTGCTTTTCTGGATGGCCTTATGGTCTTTCGGAGCAGCTGGTGTTGTGGCTTCAAGCATGGGTGATGGTGGACGCTGGTGGCTTCTTGTGGTCCTTGCCGTAAGCTTATTTTGGACTGGTGCTGTCCTTTGTAATACTGTACATGTCATAGTGTCTGGGATGGTGTTTCTTGTTCTTATCCATGGTGGCAGAGAGTCAGCGTCGATGCCCCCTAACTCATTAGTGAAATCACTACAGTATGCTTTAACAACATCTTTCGGAAGCATTTGTTATGGCTCATTATTTACTGCTGCAATCAGGACACTACGGTGGGAGATAAGGGGATTCCGGTCAAAGATTGGCAACAATGAGTGTCTTCTGTGCTGTGttgatttccttttccatCTTGTAGAGACTCTTGTCCGTTTCTTCAACAAGTATGCCTATGTTCAGATTGCTGTTTATGGTAAAAGTTTTAATCACTCAGCTAGAGACGCCTGGGAGTTATTCCAGTCAACTGGAGTTGAATCACTTGTTGCCTATGATTGTTCTGGTGCTGTCCTATTAATGGGCACCGTTTTTGGTGGGCTCATTACTGGAACTTGCTCTGGTGTTTGGGCCTGGATTAAATGGAGTGATAGAGTGATTATGATTGGGTCCACATCAATGCTGATAGGAATGGTATTGGTTGGAGTGGCAATGGTTGTGGTGGAAAGTGCTGTTACATCCATATATATCTGCTATGCAGAAGACCCTTTGTTAATTCACAGATGGGACACTGAATTTTTTAACCAGATGTCTGAGACGCTACACCAGCGACTGCAACACAGGAGCGCAAGAGCAAGGGAAGTGTTAACCCACACTTCTCACGATCAGCTTGACAGCCGCATACGAGAAAACAGCTCAGTTTG 1514 0.4538 MAESPSFSSSSSDVGSIATADQNAGRSRVSADSTQVVPTEQSRRRWHDVFWLGIFLIHLIGLGFLMGVLGLNRFKKENRLNIDRYTAGISENEAGLTEDYWPLYAVAGGVGTLLGWSWLLLLGSRANQMMKLFVHILTTYLAVISVLCFWVEQFFWGVVFAIGAALQFLYVISVIDRLPFTMLVLQKAVKMVWNLSEVMRVAYAFMLVVLFWMALWSFGAAGVVASSMGDGGRWWLLVVLAVSLFWTGAVLCNTVHVIVSGMVFLVLIHGGRESASMPPNSLVKSLQYALTTSFGSICYGSLFTAAIRTLRWEIRGFRSKIGNNECLLCCVDFLFHLVETLVRFFNKYAYVQIAVYGKSFNHSARDAWELFQSTGVESLVAYDCSGAVLLMGTVFGGLITGTCSGVWAWIKWSDRVIMIGSTSMLIGMVLVGVAMVVVESAVTSIYICYAEDPLLIHRWDTEFFNQMSETLHQRLQHRSARAREVLTHTSHDQLDSRIRENSSV 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00789 504 Pfam Plasma-membrane choline transporter 158 453 IPR007603 GO:0022857|GO:0055085
Bva11g00789 504 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 30 492 - -
Bva11g00789 504 MobiDBLite consensus disorder prediction 1 36 - -
Bva11g00789 504 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 30 492 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00789 Bva-Chr11 10626679 10630938 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00789 11 10626679 10630938 Bva11g00789 11 10626679 10630938 ECH