Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00788 ATGCAGAGCTTCAAGACAGCTCCTCCCCCAAATTCTCAGCTCTATTGTCATTCCTCCTTCTTTCTTCGAGATGACTCAACCAGAAACCAAACACGTTTTCCTGATCTTCAGGAGCTTCAACGATCCACTGCTGCCTTTCAACATGACGATGCTGTTGATTTAAGCTCAAgATCTATGTTTAGTGTGAAGTCGAGCAATGTCGCAGTTGTTGCTAATAACTTGCAGTACGGGACATTGAACAcgAGCATTGGGTCTGTAGAAATTGGTTCAACAGGGGCAGGGTGCCTTGATACAGAGCAGCATATCATGTATCAGAAAGGAGCCACTGCAGCAACGGCGGCGCCGGCGCCGGCGGGGAACGGGCATGTGGAGAATTGGGGTGATTCAGGCATAGCAGATAATAGCCAACAAACTGATACTTCCACTGATATTGACACTGATGATAGAAACCAATGCAATAGAATTCAGCATGGAGCACTTGTTGCCGTGGATTCCATGGATCAATCAAAGAGCAAAACTGAAGACCACAAGACCCTTCGCAGGTTGGCACAGAATCGAGAGGCTGCAAGGAAGAGTAGGCTAAGGAAAAAGGCATATGTACAGCAATTGGAGAACAGTCGTCTCAGGCTCGCACAATTAGAGCAAGAGCTCCAACCTGCCCGACAGCAGGGTATATTTATCCCAACTGGACTTCAAGGTGATCATGGTCATTCAATGGCCGGAAATGGTGCCTTGGCATTTGACATGGACTATGCACGCTGGGTTGATGAGCATCAACGGCTGATCAATGACCTAAGATCAGCGGTGAATTCTCAAGTAGGTGATAATGAATTGCATCTTCTTGTTGAGGGTGTAATGGCACATTATGATGAAGTATTCAGGCTAAAGAGCATAGGGGCAAAGGCTGATGTATTTCACATGCTTTCTGGGATGTGGAAGACACCTGCCGAAAGATGTTTCATGTGGCTTGGTGGATTCCGGTCATCTGAACTTCTCAAGGTACTTGAGAACCACCTTGAGCCGTTAACAGAACAGCAAATAGTGGGCATTTACAATCTGCTGCACTCTTCTCAGCAAGCTGAAGATGCTTTATCACAAGGCATGGATGCTTTGCAACAATCCCTTCTAGAGACACTCTCCCCTCCCTCCCTTGTATCGGGTGCTTTGGGAAATGTTGCCGATTACATGGGACAAATGGCAGTTGCAATGAGTAAGCTTGCAACACTGGAGAATTTCCTTCATCAGGCTGACCTCCTGAGGCAACAGACTCTCCAACAATTGCAGCGAATTTTGACCGTGCGCCAAGCTGCTCGAGCTCTCCTCGTCATAAACGATTATATTTCTCGGCTGCGAGCACTCAGTTCATTATGGTTAGCTCGCCCTAGAGAGTA 1391 0.4702 MQSFKTAPPPNSQLYCHSSFFLRDDSTRNQTRFPDLQELQRSTAAFQHDDAVDLSSRSMFSVKSSNVAVVANNLQYGTLNTSIGSVEIGSTGAGCLDTEQHIMYQKGATAATAAPAPAGNGHVENWGDSGIADNSQQTDTSTDIDTDDRNQCNRIQHGALVAVDSMDQSKSKTEDHKTLRRLAQNREAARKSRLRKKAYVQQLENSRLRLAQLEQELQPARQQGIFIPTGLQGDHGHSMAGNGALAFDMDYARWVDEHQRLINDLRSAVNSQVGDNELHLLVEGVMAHYDEVFRLKSIGAKADVFHMLSGMWKTPAERCFMWLGGFRSSELLKVLENHLEPLTEQQIVGIYNLLHSSQQAEDALSQGMDALQQSLLETLSPPSLVSGALGNVADYMGQMAVAMSKLATLENFLHQADLLRQQTLQQLQRILTVRQAARALLVINDYISRLRALSSLWLARPRE 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00788 463 CDD bZIP_HBP1b-like 177 229 - -
Bva11g00788 463 Pfam bZIP transcription factor 176 206 IPR004827 GO:0003700|GO:0006355
Bva11g00788 463 PANTHER TRANSCRIPTION FACTOR PERIANTHIA 46 463 - -
Bva11g00788 463 PANTHER TRANSCRIPTION FACTOR TGA9 46 463 - -
Bva11g00788 463 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 175 218 IPR004827 GO:0003700|GO:0006355
Bva11g00788 463 Pfam Seed dormancy control 262 336 IPR025422 GO:0006351|GO:0043565
Bva11g00788 463 SMART brlzneu 173 244 IPR004827 GO:0003700|GO:0006355
Bva11g00788 463 ProSiteProfiles DOG1 domain profile. 244 460 IPR025422 GO:0006351|GO:0043565
Bva11g00788 463 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 180 195 IPR004827 GO:0003700|GO:0006355
Bva11g00788 463 Gene3D - 176 224 - -
Bva11g00788 463 SUPERFAMILY Leucine zipper domain 177 218 IPR046347 GO:0003700|GO:0006355
Bva11g00788 463 Coils Coil 196 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00788 Bva-Chr11 10619133 10623141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00788 3 463 bZIP Transcription Factor Family AT1G68640 60.970 8.97e-174 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva11g00788 DOG1 4.3e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00788 11 10619133 10623141 Bva11g00788 11 10619133 10623141 ECH