Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00780 ATGGCCACCGATTCCGAGGGCTCCCGTCACAAGCACCGACGATCATCCTCCACCGAAGAGGTCGATAGATCTTCGAAGCGCCACAAGCATCGCCATCATAGCCATCGGCGCCACCGACATCGCCATGGTAGCAGAAAACgcgaagaagaaaaagaaatcaatgatGAAACTGTTGCCACTGTTCCCTCTTCAAATCCTGCTATTGAGTCTCGGCCTGAAGATGATGTAGAGGAGGGGGAGATTCTGGAAGAGGAGGTCGGTGAGATTGGGAAAAAGCTCACGGGGCATGATGCTGACTCCGGCGAGATTCAGGTGACAAGAGATCGAGATGTTCGATCTGATAAAGCAAATCTGGGACTTCTCGTTGAAGATTCTTATTTGCAGGATGAAACCGCCGTCTCTCTCAAAGAGACTGCAGGAATCAAtggtaaaaattcaaaaaataggGGAGAGGACATTGACAGTGAAAAGTTTGTAACTAATACAGCATCTTATGGAGAAGATGAGACTTTCCATCAGAGTGGCATTGGTCATAGAATACTTGAAGATGGTGTTTCTCCTACTCGTTCAAGTGCTGAGCCTCAAGAGAAAAGGGATAAAAGAGCCAGTAGAGATGGTTTGGTCAATGGATATTTGGATTATAAGTCTTCTAAAGAATTGAAGAGGCAGCATGGCTCTTTGAAAGGAATTGAGAAACTAAGAGCTGactatgatgatgatgatgatgatgatttggAGGTTAATGGAAGCAAATTAAGCATCCATAGGAATTCATCTTCTGAAAGTGTAGGAGAAAAGTATAGGACCTCAGTGAGTTTGCCTTCTCGTGATAGATATAGGAGTCGATCACGATCAAGTGGTCGTACTAGGGACAGGTCTAGGTCTCATAGTAAAGAATATTCTCATTCAAAGAGAAGACATCTTAGAGAACAAGAGACCCTTTCATATGGTGGTAGAGACAAAACTGATTATGACCTAGATGATGAAAGAATGATGGAAGGCAGCAGGGAGTGTGGTCGTGGTAGTAAAGAATTAACGGCGTATGATGGAAGGGAACACAGTACCAGTTATTCCAGTAGATACATTGGAAAGGGGGATAGGCATCACTGTCGGGAGACCCAAAATAGAGAGAGGAGCAAGGAGAGGGATGTGGATAGAGacttgagaagagaaaaggaacgAGAAAGGAGCAGGCATAGGGAGATTGACCGGGTGCTTAGGAGGGAAAAGGAACGAGAAAGGAGCCATGAGCGGGATAGAAGGGATGTAGAAAAAGATAGGAGCAGGGGAAGGGAGGTGGATAGGGATAGGAGAAGAGATAAGGAAGGGGATAGGGACTTTGACACAGTGGCTGATAGGGATAGGAGAAGGGGGAGGGAAAGAGATAGGAGCAGGGACAGAGTCAGAGGTGGTGAGAGAGATAGAGACCGTGATGATGTTGAAAAGGATGATAGAAACCAGAGTAGGGATAAAATTAGGGAAAGGGAGAGGGAAAGGGAAGATGATAGAAACAGGAAGAAGGATAGAGATATTGCCAATGATAAGGATAGGCATCCAGGTGATGGGGATGTTCATGACAGTCGAGATAGATATAGACACTCTAGGCATTCTAGACTTGAAGAAACGGATTACCACcaagatagaaaaagaaattctgaGGCCCCAAAGGCTTATAACTCTACAGGAAACTCCTTGGAAGGGGGTGAAAACAAGCGTGAAAgAGGTGAGTATGAACAAGATGACATAGATGAGGAGGAGACATTACCCTTGGCTGAACAGGAAGAGGAAGATCTCAACAGAATTAAGGAAGAGAGTAGAAGAAGAAGGGAAGCTATCTTAGAGAAATACAAGCAGCAGCAACGAGTAGATCaaacatatgaaaatgaagacaaagACAAGGAGCCTGTAAATGTTCCTACTTCAACTCCAGAAATTCCTGATGGCAAGAATGATGGTAATGATGCCTATGATGCGGAAACATCATTTGCTGTTGGGAAATCACCAGAAAATGGAAATGTTGCTTCTGGGAAGACTTCTGGTGCCGGTGGGCTGGGAGATGGTACTCCAAAGAGTGAAAGGTCAAATGATATGTTTTGTGATGATATATTTGGCGAGACGCCTACTGGGGTTCGGAAAATGGGCAAAGGAGATGGGTTACGTATTGAGAGGAGTGGCCTGCACGATAATTGGGATGATGCAGAGGGGTATTACAGCTATCGTCTTGGTGAAATACTTGATGGCCGATATGAAGTTACAGCTTCTCATGGGAGAGGTGTCTTTTCAACAGTTGTTCGTGCAAAGAATCTCAATGCTGGTAATGGTGAGCCAGAAGAAGTGGCTATTAAAATTATTCGTAATAATGAAACAATGTACAAGGCTGGTATGGATGAGTTGGTCATATTAAAGAAACTAGTAGGTGCAGATCCAGAGGATAAACGTCATTGTGTTCGTTTCCTTTCAAGTTTTAAGTATAGGAATCACCTTTGTTTAGTTTTTGAATCTCTTAATATGAATCTACGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTAACCGCTGTGAGAGCATATGCAAAACAACTGTTTATTGCCCTGAAGCATCTTCGGAACTGCGGTGTTCTCCACTGTGATATTAAGCCAGATAACATGTTGGTGAATGAGGCTAAAAATGTGTTGAAGCTTTGTGACTTTGGTAATGCCATGTTTGCTGGTAAGAATGAAGTCACACCATACCTTGTAAGCCGCTTTTACCGAGCACCTGAGATAATACTTGGCTTGCAGTATGATCATCCATTAGATATTTGGTCTGTAGGCTGTTGTTTGTATGAAGTCTATACTGGGAAAGTTCTTTTTCCTGGTCCTACTAACAATGACATGCTACGGCTTCACATGGAATTGAAGGGCCCTTTTCCAAAGAAGATGCTTCGcaagggAGCATTTACTGAGCAGCATTTTGATCAGGATCTGAATTTTTTTGCTACTGAAGAGGATCCTGTTACAAAAAAGACAATCAAGCGGATGATTCTCAACATAAAGCCCAAGGATATCGGAACAATCATTACTGGCTCTCCGGGGGAGGACCCAAAGATGCTAGCTAACTTCAAGGATCTTCTTGAAAAAGTTTTTGTCTTGGATCCTGACAAGAGGTTGACAGTCTCACAAGCATTGAACCACCCTTTCATCACTGATTCTAATCATTTGGCATTATTTATCTTCTATGCACGCCTTAAGGGGTATCAGCAGAATTGTTGGCCAGTTGAAAGGGAAAAGGGTGGTGTCCAGTCAGGCATACACCTTATTGGCGGGTGGAATATACTGTTTCTATTGAAAACCAGCCACTGTGCTGAGGCAACCCTCCATTGCAGCTTTAAAGGGACCCAGGAGAAGGCATGTGCACTGGAGGTGTTTGGCTTTGTTCTTGAAGATAATTTGTATCTgAACAGTAATCCATG 3461 0.4198 MATDSEGSRHKHRRSSSTEEVDRSSKRHKHRHHSHRRHRHRHGSRKREEEKEINDETVATVPSSNPAIESRPEDDVEEGEILEEEVGEIGKKLTGHDADSGEIQVTRDRDVRSDKANLGLLVEDSYLQDETAVSLKETAGINGKNSKNRGEDIDSEKFVTNTASYGEDETFHQSGIGHRILEDGVSPTRSSAEPQEKRDKRASRDGLVNGYLDYKSSKELKRQHGSLKGIEKLRADYDDDDDDDLEVNGSKLSIHRNSSSESVGEKYRTSVSLPSRDRYRSRSRSSGRTRDRSRSHSKEYSHSKRRHLREQETLSYGGRDKTDYDLDDERMMEGSRECGRGSKELTAYDGREHSTSYSSRYIGKGDRHHCRETQNRERSKERDVDRDLRREKERERSRHREIDRVLRREKERERSHERDRRDVEKDRSRGREVDRDRRRDKEGDRDFDTVADRDRRRGRERDRSRDRVRGGERDRDRDDVEKDDRNQSRDKIREREREREDDRNRKKDRDIANDKDRHPGDGDVHDSRDRYRHSRHSRLEETDYHQDRKRNSEAPKAYNSTGNSLEGGENKRERGEYEQDDIDEEETLPLAEQEEEDLNRIKEESRRRREAILEKYKQQQRVDQTYENEDKDKEPVNVPTSTPEIPDGKNDGNDAYDAETSFAVGKSPENGNVASGKTSGAGGLGDGTPKSERSNDMFCDDIFGETPTGVRKMGKGDGLRIERSGLHDNWDDAEGYYSYRLGEILDGRYEVTASHGRGVFSTVVRAKNLNAGNGEPEEVAIKIIRNNETMYKAGMDELVILKKLVGADPEDKRHCVRFLSSFKYRNHLCLVFESLNMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLQYDHPLDIWSVGCCLYEVYTGKVLFPGPTNNDMLRLHMELKGPFPKKMLRKGAFTEQHFDQDLNFFATEEDPVTKKTIKRMILNIKPKDIGTIITGSPGEDPKMLANFKDLLEKVFVLDPDKRLTVSQALNHPFITDSNHLALFIFYARLKGYQQNCWPVEREKGGVQSGIHLIGGWNILFLLKTSHCAEATLHCSFKGTQEKACALEVFGFVLEDNLYLNSNP 1153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00780 1153 MobiDBLite consensus disorder prediction 593 637 - -
Bva11g00780 1153 MobiDBLite consensus disorder prediction 85 108 - -
Bva11g00780 1153 MobiDBLite consensus disorder prediction 362 554 - -
Bva11g00780 1153 SMART serkin_6 749 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00780 1153 MobiDBLite consensus disorder prediction 192 206 - -
Bva11g00780 1153 Gene3D Transferase(Phosphotransferase) domain 1 809 1065 - -
Bva11g00780 1153 MobiDBLite consensus disorder prediction 251 269 - -
Bva11g00780 1153 MobiDBLite consensus disorder prediction 1 25 - -
Bva11g00780 1153 Coils Coil 591 622 - -
Bva11g00780 1153 Coils Coil 406 426 - -
Bva11g00780 1153 ProSitePatterns Serine/Threonine protein kinases active-site signature. 876 888 IPR008271 GO:0004672|GO:0006468
Bva11g00780 1153 SUPERFAMILY Protein kinase-like (PK-like) 736 1073 IPR011009 -
Bva11g00780 1153 MobiDBLite consensus disorder prediction 1 108 - -
Bva11g00780 1153 Gene3D Phosphorylase Kinase; domain 1 720 808 - -
Bva11g00780 1153 MobiDBLite consensus disorder prediction 271 350 - -
Bva11g00780 1153 ProSiteProfiles Protein kinase domain profile. 749 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00780 1153 MobiDBLite consensus disorder prediction 136 695 - -
Bva11g00780 1153 MobiDBLite consensus disorder prediction 215 235 - -
Bva11g00780 1153 MobiDBLite consensus disorder prediction 26 44 - -
Bva11g00780 1153 PANTHER DUAL SPECIFICITY PROTEIN KINASE 452 1065 - -
Bva11g00780 1153 Coils Coil 485 505 - -
Bva11g00780 1153 CDD STKc_PRP4 748 1064 IPR044092 GO:0004674|GO:0006468|GO:0045292
Bva11g00780 1153 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 452 1065 - -
Bva11g00780 1153 Pfam Protein kinase domain 750 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00780 Bva-Chr11 10582664 10589924 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00780 705 1064 MAP Kinase Gene Family AT2G18170 29.947 2.62e-29 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Bva11g00780 Pkinase 3.2e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00780 11 10582664 10589924 Bva11g00780 11 10582664 10589924 ECH