Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00777 atggcttctccttttctttccaataCCGTTGCCCCCAATTCCACCGCCATTTCCTTCTCCTCTTCCATCTCCACCTCCCTCCCATGGCGGAGATTCATCGCATTTCCCGTCAAGCCCCGCCAGAGAACCTTCTCTGTTCAATCCAAGATCAGGGAAATCTTCATGCCCGCCCTTAGCTCTACTATGACCGAGGGTAAGATTGTGTCATGGGTTAAATCTGAAGGTGACGTTCTCTCCAAGGGCGAGAGTGTTGTCGTCGTCGAATCTGACAAAGCTGACATGGACGTTGAGACTTTCTACGATGGGATTCTTGCCGCTATTGTAGTTGGCGAGGGTGAAACCGCCCCTGTTGGTTCTCCGATCGGGATATTGGCGGAGTCCGAAGAGGAAGTTGCAGAGGCCAAAGCGAAAGCAGCTAAATCCTCTTCTACTGCAGCTGCTGCACCTGTTGCTCCCAGTCCTTCACCGGAAACTTCGGATCCTGCTCCAGCGATTGCCCAGTCTCCCCCTCCACCAGCTAAGGTAGCTTCTGATGGGCCGAGGAAGACCGTGGCGACACCTTATGCAAAGAAGCTAGCGAAGCAGCATAAGGTAGACATTGGATCGGTGGTCGGGACTGGTCCATACGGACGGATTACTGCTTCAGATGTGGAGGCGGCTGCTGGAATTACACCTTCCAAGAGCAATGTGGCTCCAGCGCCTGCTCCGGCAGCTGCATCTCCCCCAAAAGCTGCTGCTGCTCCAGCAGCCGCTCCACCTCCAATTCCAGGTTCTACTGTAGTTCCTTTCACAACTATGCAATCAGCTGTTTCAAAGAACATGGTTGACAGTCTTTCTGTGCCTACATTCCGTGTTGGCTATCCTGTTACCACTGACGCACTTGATGCTCTATATGAGAGGGTGAAACCGAAGGATGGGAAGAACTTCACCTATAACAGTAACATAAACATTGCTGTTGCTGTGGCAATCAATGGTGGTTTAATAACGCCTGTTCTTCAGGATGCAGATAAGTTGGATCTCTATCTGTTGTCCCAAAAATGGAAAGAGCTTGTGGAGAAAGCTCGTGCGAAGCAATTGCAACCTCATGAATATAATTCAGGAACTTTCACACTCTCTAATTTGGGCATGTTTGGAGTTGACCGGTTTGATGCCATCTTACCACCTGGCCAGGGGGCTATCATGGCTGTAGGAGCCTCAAAGCCTACTGTTCTAGCTGATAAAGATGGATTCTTCAGTGTGAAAAGCAAAATGCTGGTGAATGTAACAGCTGATCATCGGATAATATATGGTGCTGACTTAGCTGCCTTCCTTCAAACATTCTCGAAAATCATTGAAAACCCAGAAAGCCTAACATTATA 1358 0.486 MASPFLSNTVAPNSTAISFSSSISTSLPWRRFIAFPVKPRQRTFSVQSKIREIFMPALSSTMTEGKIVSWVKSEGDVLSKGESVVVVESDKADMDVETFYDGILAAIVVGEGETAPVGSPIGILAESEEEVAEAKAKAAKSSSTAAAAPVAPSPSPETSDPAPAIAQSPPPPAKVASDGPRKTVATPYAKKLAKQHKVDIGSVVGTGPYGRITASDVEAAAGITPSKSNVAPAPAPAAASPPKAAAAPAAAPPPIPGSTVVPFTTMQSAVSKNMVDSLSVPTFRVGYPVTTDALDALYERVKPKDGKNFTYNSNINIAVAVAINGGLITPVLQDADKLDLYLLSQKWKELVEKARAKQLQPHEYNSGTFTLSNLGMFGVDRFDAILPPGQGAIMAVGASKPTVLADKDGFFSVKSKMLVNVTADHRIIYGADLAAFLQTFSKIIENPESLTL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00777 452 Pfam Biotin-requiring enzyme 52 123 IPR000089 -
Bva11g00777 452 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 177 221 IPR036625 GO:0016746
Bva11g00777 452 Pfam e3 binding domain 184 218 IPR004167 GO:0016746
Bva11g00777 452 Gene3D - 179 222 IPR036625 GO:0016746
Bva11g00777 452 MobiDBLite consensus disorder prediction 154 176 - -
Bva11g00777 452 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 75 104 IPR003016 -
Bva11g00777 452 CDD lipoyl_domain 52 124 - -
Bva11g00777 452 Gene3D - 300 451 IPR023213 -
Bva11g00777 452 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 4 OF PYRUVATE DEHYDROGENASE COMPLEX, CHLOROPLASTIC 304 452 - -
Bva11g00777 452 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE ACETYLTRANSFERASE COMPONENT 4 OF PYRUVATE DEHYDROGENASE COMPLEX, CHLOROPLASTIC 12 304 - -
Bva11g00777 452 MobiDBLite consensus disorder prediction 235 251 - -
Bva11g00777 452 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 306 451 IPR001078 GO:0016746
Bva11g00777 452 ProSiteProfiles Biotinyl/lipoyl domain profile. 50 125 IPR000089 -
Bva11g00777 452 MobiDBLite consensus disorder prediction 134 182 - -
Bva11g00777 452 Coils Coil 124 144 - -
Bva11g00777 452 MobiDBLite consensus disorder prediction 226 251 - -
Bva11g00777 452 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 304 452 IPR045257 GO:0006086|GO:0045254
Bva11g00777 452 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 12 304 IPR045257 GO:0006086|GO:0045254
Bva11g00777 452 SUPERFAMILY CoA-dependent acyltransferases 246 450 - -
Bva11g00777 452 SUPERFAMILY Single hybrid motif 49 142 IPR011053 -
Bva11g00777 452 Gene3D - 45 149 - -
Bva11g00777 452 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 184 221 IPR004167 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00777 Bva-Chr11 10573283 10576673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00777 17 452 Acyl Lipid Metabolism Gene Families AT3G25860 73.448 0.0 595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00777 11 10573283 10576673 Bva11g00777 11 10573283 10576673 ECH