Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00763 ATGACTTCTGCTGCGAGGAACGTGGTGGCAAGCGCCGTCGGTGGCAAAAAGACGAGAGCCTGTGATAGTTGTATAAAGAAGCGGGCCCGATGGTATTGTGCTGCCGACGATGCTTTTCTCTGTCAAACTTGTGACTCTTCCGTTCACTTGGCGAATCCCCTGGCTCGTAGGCATGAAAGAGTTTTCTTGAAAAAGGTGTCGGATGAGTGGTCCGATGGTGGCGCCGCTTGGGAAGTTGCCAATTATGCTCCGTTGTGGCACCGTGGGTTCACCAAGAAGGCTCGAACACCACGACATGTGAAACGCTACTCGATCTATCATCAAACATCTAAAGTGCAAAATGAGCTTGCTCGGAGGAACCCATTTTGTATGGTGCCGGAAGTGGGATCCGACGAAGCGAATTCGCACGACGAAAATGAAGCACAGCTGCTTTATCGGGTACCCATTTTCGATCCCTCTTTGGTGGCCGAGCTGTGTACTCCTCTATCGTCGGTGACTTCAGCTGAAGCAGCAACAGCAATGGCGAGTCCTAACGAGGCAGAGAACAAAGCTAACAAGAGCATCGGAAGCAAAGATTTTTCCGGTAATAACAGTGAAGGGGTTGAAACATTCCACGAGTTTCTTCCATCTGATAAGGAACTCGCTGAATTTGCAGCAGATGTTGAGAGCTTATTGGGTAGGGGGCTAGAAGACGACTATATTGGCATGGAAGAGTTGGATCTGATTTATTCCAAACAAGAGGAGTGTTGTGTGGGTACTGGGAAAGTgaagattgaagaagaagaagaggatgtGGAAATGGCAGctgctgcttctgcttctgcttctgcagcTTGCAAGGTTGAGATGGATCAGATGGAGAGAGAGccatttgaattgaatttcgATTTTGACTCTGCCGAAGTTCTGGAAGAGATGGAGGAGAAGCTTGGTTTGGAAATCAACAGAGATTTCAAGAATGGCTATGGTGGGGAATTGGATGGGAATGACaaagtgaagaagaagatactGTTGAGACTTGATTATGAGGCAGTCATCACTGCCTGGGCAAGTCATAAGTGTCCGTGGACCAATGGAAATAAACCAGAATTTGGCCCTAACGAGTGCTGGCTTGATTGCATgGGGGCTTGCGGAATAGAGCTTCACCATGCGTACGGTGAATGGGGTGGGCTTGGGATTCAGCCGACAATAGCAGACGTGGGAAGAGAGGCGAGGGTGTCAAGGTACAGAGAGAAGCGTCGGACGAGGTtgttttctaagaaaataagGTACGAGGTTCGGAAACTGAACGCAGAGAATAGACCCAGAATGAAGGGTAGGTTTGTTAAGAGGGCTTCTTTTGCAGCAGTATCACCTAGTTTTCCTTTGCTAACCAAATG 1379 0.4503 MTSAARNVVASAVGGKKTRACDSCIKKRARWYCAADDAFLCQTCDSSVHLANPLARRHERVFLKKVSDEWSDGGAAWEVANYAPLWHRGFTKKARTPRHVKRYSIYHQTSKVQNELARRNPFCMVPEVGSDEANSHDENEAQLLYRVPIFDPSLVAELCTPLSSVTSAEAATAMASPNEAENKANKSIGSKDFSGNNSEGVETFHEFLPSDKELAEFAADVESLLGRGLEDDYIGMEELDLIYSKQEECCVGTGKVKIEEEEEDVEMAAAASASASAACKVEMDQMEREPFELNFDFDSAEVLEEMEEKLGLEINRDFKNGYGGELDGNDKVKKKILLRLDYEAVITAWASHKCPWTNGNKPEFGPNECWLDCMGACGIELHHAYGEWGGLGIQPTIADVGREARVSRYREKRRTRLFSKKIRYEVRKLNAENRPRMKGRFVKRASFAAVSPSFPLLTK 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00763 459 CDD Bbox1_BBX-like 20 63 - -
Bva11g00763 459 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 6 8 450 - -
Bva11g00763 459 ProSiteProfiles Zinc finger B-box type profile. 16 63 IPR000315 GO:0008270
Bva11g00763 459 Pfam CCT motif 402 444 IPR010402 GO:0005515
Bva11g00763 459 ProSiteProfiles CCT domain profile. 402 444 IPR010402 GO:0005515
Bva11g00763 459 Pfam B-box zinc finger 18 61 IPR000315 GO:0008270
Bva11g00763 459 MobiDBLite consensus disorder prediction 173 194 - -
Bva11g00763 459 SMART bboxneu5 16 63 IPR000315 GO:0008270
Bva11g00763 459 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 8 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00763 Bva-Chr11 10471832 10473963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00763 9 449 C2C2-CO-like Transcription Factor Family AT1G68520 40.523 1.70e-86 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bva11g00763 zf-B_box 1.2e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00763 11 10471832 10473963 Bva11g00763 11 10471832 10473963 ECH