Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00762 ATGAGGGTCAGCTGCAACGGCTGCCGGGTGCTCCGAAAAGGTTGCAGCGATAACTGCACCATCAGACCTTGCCTTAGCTGGATTGCATCGCCGGAATCCCAAGCCAACGCCACCCTCTTCCTCGCCAAATTCTACGGTCGCACCGGCCTTCTCAACCTCATCAATGCATCCCCACAACACCGTCGCGCAGCTGTGTTCAAGTCGTTGTTGTACGAGGCGAGTGGGAGGATTGTGAATCCAGTTTACGGGTCATTGGGTTTGCTCTGGTCCGGTGACTGGGGCCGGTGCCAAGCCGCCGTTGATGCGGTGCTCGCCGGATCGGACATCAAGGATGCGGTAGCGGATTCTGATTTGCAAGAGGAGGGTAAAGCTGCTATTCCAGCTTGCGGCTTACGCCACGTGGCAAAATATTCTGACGTGGACAAGGGCGGTGTCAACAAGGTGACGAAAGGGCGAGCTCGGTTCAAGAGGTCCGGGGAAACGAAAGTGATTAAACCGATAACGCGGCTGGGTTCGGTTGACTCAGATTCGCTTGGGAGCTTGAATTTGCGACATAGAAGGGAGAGCTCGGAGAGTGAGAGCATGTTCTCTGGTAAAACCGGGGAGCCATCGCTGGAGAACCGGGACACCGAACCGGAGCAATATCGGACGAGGAATGATGACGAGATAGGAGCCGATAAAACCGAGGTTAATTTGGCACTCAGTCTTGGATA 713 0.5526 MRVSCNGCRVLRKGCSDNCTIRPCLSWIASPESQANATLFLAKFYGRTGLLNLINASPQHRRAAVFKSLLYEASGRIVNPVYGSLGLLWSGDWGRCQAAVDAVLAGSDIKDAVADSDLQEEGKAAIPACGLRHVAKYSDVDKGGVNKVTKGRARFKRSGETKVIKPITRLGSVDSDSLGSLNLRHRRESSESESMFSGKTGEPSLENRDTEPEQYRTRNDDEIGADKTEVNLALSLG 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00762 237 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Bva11g00762 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 234 - -
Bva11g00762 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 234 - -
Bva11g00762 237 MobiDBLite consensus disorder prediction 204 227 - -
Bva11g00762 237 MobiDBLite consensus disorder prediction 181 237 - -
Bva11g00762 237 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00762 Bva-Chr11 10469445 10470245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00762 1 197 AS2 family AT3G02550 48.780 2.15e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva11g00762 LOB 4.6e-23 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00762 11 10469445 10470245 Bva11g00762 11 10469445 10470245 ECH