Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00755 ATGTCTTGTGTGTGTGGGGAGGAGAtaattaagagagagagagagagaggtgtGGCAGAAGAACTGATAGAGAACTTTCaaagctctttttcttccaCCATTACTCAACTAGCCTCTATATTGCAGTCTCAAACTGAAAGTCTtacaagttttattaaaagctttgagttttattttccCCCAtctgaaacaaagaaaacagtgTTAGCCTCATTTTTCTGTCGGAGACCAGAAGGGAACCCGTTAGACCTCAACAATTTGCCAGATGACTACTCTAGAGATCATGGTAAACAAGCCCTCGAAGATAACTCCTCATCagGCtgcaggaaaaagaaaagcggCGGGAAGGATGGAAAAGACGATTGTGGGAAGGTCTATGAATGTAGATTTTGTTCCCTCAAGTTCTGCAAATCTCAGGCCCTTGGGGGACACATGAACCGCCACCGCCAAGGCTA 455 0.3429 MSCVCGEEIIKRERERGVAEELIENFQSSFSSTITQLASILQSQTESLTSFIKSFEFYFPPSETKKTVLASFFCRRPEGNPLDLNNLPDDYSRDHGKQALEDNSSSGCRKKKSGGKDGKDDCGKVYECRFCSLKFCKSQALGGHMNRHRQG 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00755 151 ProSiteProfiles Zinc finger C2H2 type domain profile. 126 151 IPR013087 -
Bva11g00755 151 PANTHER ZINC FINGER PROTEIN JAGGED 76 150 IPR031113 GO:0007275
Bva11g00755 151 MobiDBLite consensus disorder prediction 79 123 - -
Bva11g00755 151 PANTHER ZINC FINGER PROTEIN JAGGED 76 150 IPR045320 GO:0003700
Bva11g00755 151 ProSitePatterns Zinc finger C2H2 type domain signature. 128 148 IPR013087 -
Bva11g00755 151 MobiDBLite consensus disorder prediction 88 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00755 Bva-Chr11 10434522 10435673 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00755 78 150 C2H2 Transcription Factor Family AT1G13400 61.039 7.48e-18 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva11g00755 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00755 11 10434522 10435673 Bva11g00755 11 10434522 10435673 ECH