Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00746 ATGCCTCTCTCCATTGAAACACTTTTGAATCAACAGTACCCTAATCTTCCTATTGTTGACTCCTTCAATTATTCTGATGAGAACCCAAATCCTATTTTAATGTTTCAGTCATCAGCCTCTAACTATGGTACTGTGTTTGATGATGAACGAGCAAAGATGGTGCCTTTTTCAGAGAGCTTATTAGGCAATTCTTCTCCTCCAATATCAGGGACTGCTTCTGCTGATATGAACAagAGTGTGGGAGgaaacaaaaggaagagaaacaatggcaaatttgaagataaatCAAAAGAAGTGATTCGTGTAAGGGCAAAGAGAGGCCAAGCTACTGGTAGCCACAGTTTAGCAGAGAGGgtaagaagagagaaaatcaaCGAGAAACTAAAATGCTTGCAGGACTTGGTTCCGGGATGCTACAAGGCAATGGGAATGGCAGTAATGTTCGATGTGATAATAAACTATGTTCAATCACTGCAGCATCAGATTCAGTTTCTGTCCCTGAAGCTTTCAGCAGCAAGTGTGTACTTTGATTTTAACACTTCAGAGATGGATGCCTCTCAAAGCATGCCGAGAAGTACTAGCACTTATGAAATCCAAGACATGGAAAACATGATAGGAGAAGGCTATGGAGGAGGAACCTCTACTTACTTCAACCCAACATGGCCATTTTATTA 674 0.3783 MPLSIETLLNQQYPNLPIVDSFNYSDENPNPILMFQSSASNYGTVFDDERAKMVPFSESLLGNSSPPISGTASADMNKSVGGNKRKRNNGKFEDKSKEVIRVRAKRGQATGSHSLAERVRREKINEKLKCLQDLVPGCYKAMGMAVMFDVIINYVQSLQHQIQFLSLKLSAASVYFDFNTSEMDASQSMPRSTSTYEIQDMENMIGEGYGGGTSTYFNPTWPFY 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00746 224 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 106 174 IPR036638 GO:0046983
Bva11g00746 224 MobiDBLite consensus disorder prediction 80 97 - -
Bva11g00746 224 Gene3D - 110 170 IPR036638 GO:0046983
Bva11g00746 224 MobiDBLite consensus disorder prediction 65 97 - -
Bva11g00746 224 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 108 158 IPR011598 GO:0046983
Bva11g00746 224 SMART finulus 114 164 IPR011598 GO:0046983
Bva11g00746 224 Pfam Helix-loop-helix DNA-binding domain 112 136 IPR011598 GO:0046983
Bva11g00746 224 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 63 208 IPR024097 GO:0006355
Bva11g00746 224 PANTHER TRANSCRIPTION FACTOR BHLH75 63 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00746 Bva-Chr11 10359823 10361569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00746 89 223 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G25330 58.519 1.43e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva11g00746 HLH 2.3e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00746 11 10359823 10361569 Bva11g00746 11 10359823 10361569 ECH
Bva11g00746 11 10359823 10361569 Bva04g00819 04 5414756 5416377 ECH
Bva11g00746 11 10359823 10361569 Bva03g01826 03 16466369 16470350 ECH