Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00744 ATGTCAAGTGCTATGAAGAGAGAGTGTGGTGGTCCtaatgaagaagaaagtgagCTGAGAAGAGGGCCATGGACTCTTGAAGAAGACAGCTTGCTCATACACTATATTACCCGGCACGGCGAAGGTCGTTGGAACATGTTAGCCAAAAGTGCAGGATTGAAGAGGACAGGAAAGAGTTGCAGACTCAGGTGGCTGAATTACTTGAAACCAGATATCAAGAGAGGGAATCTCACTCCACATGAGCAGCTTTTGATCCTTGAACTCCATTCCAAGTGGGGTAACAGGTGGTCAAAAATTGCTCAGCATCTACCTGGAAGAACAGACAATGAGATTAAGAATTACTGGAGAACAAGGGTGCAGAAACAGGCACGCCAACTCAACATTGAATCGGGCAGCAAGAGATTCTTCGACGCTGTCCGATGTTTTTGGGTGCCAACATTGCTGCAGAAGATGGAACAGAACACTTCCTCCACCTCGTACTCCTCTGTGTCAAACATGAATCTTGGGAATTCAGCAGCAGAAGCTTCAATGCCAAACTCTAGAGTCCCTTCTCTGTCTCCATCTCCTCCTCCACAAAGGGAATCCATTGAAGCTTCAAATCATTCAAGCTCTATCTCTAGCAGCTTCAgcaacttttcttttgatcaAAGTTCAATGAAATTCTCTGAGATGCCAGAAATTTCAGAACAACCAAACAATCCTTTCCAGTTGTTTGAGCAGAATGTTTACAACAATCAAATCCAAGACAATTGGTACATGAACACTAATGGCTATGGCTATGGCATGGAAGGTGTAAACTTGGACAATCTCTCAATAATGGAAAGCTATGACACTTCACCTTCACAGCTTGAATGTCAGACTGGGGAGAGTGATTGGGTGTTTGGCATGAATGACGCTTTATGGAACATGGATGCAATGTG 920 0.4272 MSSAMKRECGGPNEEESELRRGPWTLEEDSLLIHYITRHGEGRWNMLAKSAGLKRTGKSCRLRWLNYLKPDIKRGNLTPHEQLLILELHSKWGNRWSKIAQHLPGRTDNEIKNYWRTRVQKQARQLNIESGSKRFFDAVRCFWVPTLLQKMEQNTSSTSYSSVSNMNLGNSAAEASMPNSRVPSLSPSPPPQRESIEASNHSSSISSSFSNFSFDQSSMKFSEMPEISEQPNNPFQLFEQNVYNNQIQDNWYMNTNGYGYGMEGVNLDNLSIMESYDTSPSQLECQTGESDWVFGMNDALWNMDAM 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00744 306 SMART sant 20 70 IPR001005 -
Bva11g00744 306 SMART sant 73 121 IPR001005 -
Bva11g00744 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 123 IPR017930 -
Bva11g00744 306 PANTHER TRANSCRIPTION FACTOR MYB21-LIKE 4 304 - -
Bva11g00744 306 CDD SANT 78 117 IPR001005 -
Bva11g00744 306 MobiDBLite consensus disorder prediction 171 209 - -
Bva11g00744 306 Gene3D - 77 122 - -
Bva11g00744 306 CDD SANT 23 68 IPR001005 -
Bva11g00744 306 ProSiteProfiles Myb-like domain profile. 69 119 IPR001005 -
Bva11g00744 306 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 4 304 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bva11g00744 306 Gene3D - 21 73 - -
Bva11g00744 306 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 36 45 IPR001345 GO:0003824
Bva11g00744 306 Pfam Myb-like DNA-binding domain 74 117 IPR001005 -
Bva11g00744 306 Pfam Myb-like DNA-binding domain 21 68 IPR001005 -
Bva11g00744 306 MobiDBLite consensus disorder prediction 1 21 - -
Bva11g00744 306 SUPERFAMILY Homeodomain-like 19 115 IPR009057 -
Bva11g00744 306 MobiDBLite consensus disorder prediction 191 209 - -
Bva11g00744 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 16 68 IPR017930 -
Bva11g00744 306 ProSiteProfiles Myb-like domain profile. 16 68 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00744 Bva-Chr11 10347702 10349375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00744 1 306 MYB Transcription Factor Family AT1G68320 50.649 3.29e-88 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva11g00744 Myb_DNA-binding 1.3e-14 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00744 11 10347702 10349375 Bva11g00744 11 10347702 10349375 ECH