Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00736 ATGGGTTCCAAGATGGAAGGACCGTCTACCCCAGCAATTCGACGAGATCCATATGAGGTTTTGTCTGTGTCAAGGGACTCAACTGACCAGGAAATAAAAACGGCGTACAGAAAGCTTGCTCTCAAATACCACCCTGATAAGAATGCCAGAAATCCCGAAGCTTCAGAACTATTTAAAGAGGTTGCATATTCTTATAGTATCTTATCTGACCCTGAGAAGAGAAGGCAGTATGACAGTGCAGGATTTGAGGCGTTTGATGCTGATAGCATGGACATGGAAATTGACTTATCTAATCTTGGAACTGTCAACACAATGTTCGCAGCTTTATTCAGcAAGCTAGGTGTTCCTATCAAGACAACTATTTCAGCTAATGTTCTTGAGGAAGCTCTGAATGGCACAATTACAGTCAGACCCCTTCCAATCGGAACATCAGTTAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTTGGTGTGACAATAAATGAGCAGCAGGCTGAGTCAGGGTTTGTAGTAAGGGTCACTTCAAATGCACAAAGCAAATTCAAGCTGCTCTACTTTGAACAAGATGCAAATGGTGGCTATGGTTTGGCATTGCAGGAAGATAGTGAGAAGACTGGCAAGGCGACATCTGCAGGCATGTATTTCTTACATTTCCAAGTGTACAGAATGGATTCAACTGTAAATGCGTTAGCAATGGCCAAGGATCCTGAAGCTGCCTTTTTTAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTTTCGGAGCTAAAGCCTGGCACTCACATATTTGCTGTTTATgGAGATAACTTCTTCAAGACTGCCAGCTATACGATTGAGGCAATTTGTGCAAAATCATATGAGGACACCAACCATAAACTCAAGGACATCGAAGctcaaattttaagaaagagGAATGAGCTACGCCAATTTGAAACAGAATATAGAAAGGCATTGGCGCATTATCAAGAAGTGACTGATAGATACACCCGAGAAAAACAGTCTGTGGATGAGCTTCTGAGACAGAGAGACAATATCCATTCTTCGTTCACGGTTGCCAGGTCGATCAATATTAGTGGAAGTAGTAGTAATTTGAGTAATGGAAGTACAAGCAAAGTTGACGTTGAAGATCCCAGAGCAGAGAGTCCTGTGGAAGATGGAGGATCAGATGGCAAGGATAAATCAGGCAAAAAGAAATGGTTTAATCTCAATCTTAAGGGTTCTGATAAAAGGTTGATTTG 1238 0.4111 MGSKMEGPSTPAIRRDPYEVLSVSRDSTDQEIKTAYRKLALKYHPDKNARNPEASELFKEVAYSYSILSDPEKRRQYDSAGFEAFDADSMDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTITVRPLPIGTSVSGKVEKQCAHFFGVTINEQQAESGFVVRVTSNAQSKFKLLYFEQDANGGYGLALQEDSEKTGKATSAGMYFLHFQVYRMDSTVNALAMAKDPEAAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEAICAKSYEDTNHKLKDIEAQILRKRNELRQFETEYRKALAHYQEVTDRYTREKQSVDELLRQRDNIHSSFTVARSINISGSSSNLSNGSTSKVDVEDPRAESPVEDGGSDGKDKSGKKKWFNLNLKGSDKRLI 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00736 412 SMART dnaj_3 15 73 IPR001623 -
Bva11g00736 412 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Bva11g00736 412 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 2 410 - -
Bva11g00736 412 MobiDBLite consensus disorder prediction 373 399 - -
Bva11g00736 412 Gene3D DnaJ domain 4 98 IPR036869 -
Bva11g00736 412 SUPERFAMILY Chaperone J-domain 15 88 IPR036869 -
Bva11g00736 412 CDD DnaJ 16 70 IPR001623 -
Bva11g00736 412 Pfam DnaJ domain 16 78 IPR001623 -
Bva11g00736 412 Coils Coil 286 341 - -
Bva11g00736 412 MobiDBLite consensus disorder prediction 360 399 - -
Bva11g00736 412 PRINTS DnaJ domain signature 73 92 IPR001623 -
Bva11g00736 412 PRINTS DnaJ domain signature 53 73 IPR001623 -
Bva11g00736 412 PRINTS DnaJ domain signature 18 36 IPR001623 -
Bva11g00736 412 PRINTS DnaJ domain signature 36 51 IPR001623 -
Bva11g00736 412 PANTHER CHAPERONE PROTEIN DNAJ 15-LIKE 2 410 - -
Bva11g00736 412 MobiDBLite consensus disorder prediction 1 27 - -
Bva11g00736 412 ProSiteProfiles dnaJ domain profile. 16 81 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00736 Bva-Chr11 10283124 10288563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00736 9 79 C2H2 Transcription Factor Family AT1G74250 42.105 7.46e-12 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00736 11 10283124 10288563 Bva11g00736 11 10283124 10288563 ECH