Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00729 ATGACTTCATTCTATCAGCTCTGTGTCCTTCTTCTCTGTTATTTTCCGCTTCTTCTCTTAGCTCAATCAGGcaccaaacaaaaatactATGGAAACTGTCCACTGTATTCTAACTGTGGAAATTTTTCGGGTTTTTATATCCCATTCTCCAACACATCGAGCTCAGAATGTGGCTTGCACATAAGGGGCTGTGATAATTCAAGTAGAAAAGCAGAAGTTGAATTAGAAGACAGAAGATGGTATGAAATTGAAAGCATTTATCGGAATAACAAGTCAAATTCAATCATCGTGCAAGATAACGAGCTACAAAAGCATTTGCCAAAGAAGTGCAGCGACTTCGACAATGATATTCTTCCATTCCCTCGTCTTCCTCTCTCTTCTGAGAAGATATTTCACATAGTAAACAGTATGATCTTGTATAGATGTAAACATCCCAGCAACATCACCTCTGAAAGCTTCTCAAGATATACAGACTGTACTAATTATGATATCTACTATAGTTTTCAACCAGTTGATGAAAAGTACGAAGAGTTCAGTACACATTCATGTTCAAACTTTCAGGTTCTGTTTGATCCTGATCCAAAATCTCAACATTCTAATAacccatttaaatttttgaccgCAAAACTACAAGTACAATTAAACTTTCCCGAGGAATGTGTCGACTGTTATGAGACAGCAGGCATCTGTCTTGACGGAGGAGAATCTTACAATTGTAACAAAGCTGCAGCGGAGGATAAGCACAAGTCATGGAAGATGGTGATAGTAGGTTCAATCATTGGAGGCGCATTcatcataataattataatagcaCTGCTCTTCTACAAACGAAGACATCCTTCTTCCAGCTTCAAATACCAATCAAGAAACATTGATGGTGATCTCGACTCAAATGGAGACCTAGAATGTAGCAGAATCTTCTTCGGGATTCCTGTGTTCTCCTACAAGGAACTCGAGGAAGCAACAAACAATTTCGACTGTACCAGAGAACTAGGGGAAGGGGGCTTTGGAACTGTTTACTATGGGAAACTCCAAGATGGACGTGAAGTTGCTGTCAAGCGCCTGTATGAGCATAATTACAGGCGAGTACAGCAATTCATGACTGAAATTCAGATCCTCACACGCTTGCGCCACACAAATCTGGTAACCCTCTATGGCTGCACTTCCCGTCACAGCCGTGAACTACTACTGGTTTATGAGTTTATTCCAAATGGCACCGTGGCTTGTCATCTCCATGGAGATTTAGCAAAGCCAGGCTCACTTCCATGGTCTGTACGAATGAAAATCGCAATAGAGACCGCTAGTGCATTGGCTTATCTCCATGCTACTGATATCATTCATCGGGATGTGAAAACCAACAACATTCTACTAGACAATCATTTTTGTGTTAAAGTTGCAGACTTTGGGCTTTCAAGACTTTTTCCAAATGATGTAACTCATGTTTCCACAGCTCCACAAGGAACCCCAAGTTACCTAGATCCAGAATATTACCAATGCTATCAGCTTACTAACAAGAGTGATGTATATAGCTTTGGAGTTGTGCTCCTTGAGCTAATATCATCCATGCCAGCTGTTGATGTCACTAGGAGCAGGAACGAGATTAACCTGGCAATTCTAGCGGTAAGGAAGATTCAAAACTCTGTGTTGAGTGAGCTGATAGATCCTTCCCTTGGATTTGAGTCAGATAATGAAGTTAAAAGAATGATAGTTTCAGTGGCAGAATTAGCTTTTCAGTGCCTGCAACTGGACAGGGATACGAGACCTGCCATGGATCAAGTTTTGAGGATGCTGGAGAGAATTGAAAAAGGGACAGATGAACAGGAGCATTTGGAGGAGGAAGATCTTCATGAAATTAGGATATCTAGCAATGCACATCCACCTCCATCACTGTCACCGGAGAACGATGGGATAGGATCATTGAAGAATCTCAAGCCACCACGCTTTCACCAGACGCTCTG 1958 0.404 MTSFYQLCVLLLCYFPLLLLAQSGTKQKYYGNCPLYSNCGNFSGFYIPFSNTSSSECGLHIRGCDNSSRKAEVELEDRRWYEIESIYRNNKSNSIIVQDNELQKHLPKKCSDFDNDILPFPRLPLSSEKIFHIVNSMILYRCKHPSNITSESFSRYTDCTNYDIYYSFQPVDEKYEEFSTHSCSNFQVLFDPDPKSQHSNNPFKFLTAKLQVQLNFPEECVDCYETAGICLDGGESYNCNKAAAEDKHKSWKMVIVGSIIGGAFIIIIIIALLFYKRRHPSSSFKYQSRNIDGDLDSNGDLECSRIFFGIPVFSYKELEEATNNFDCTRELGEGGFGTVYYGKLQDGREVAVKRLYEHNYRRVQQFMTEIQILTRLRHTNLVTLYGCTSRHSRELLLVYEFIPNGTVACHLHGDLAKPGSLPWSVRMKIAIETASALAYLHATDIIHRDVKTNNILLDNHFCVKVADFGLSRLFPNDVTHVSTAPQGTPSYLDPEYYQCYQLTNKSDVYSFGVVLLELISSMPAVDVTRSRNEINLAILAVRKIQNSVLSELIDPSLGFESDNEVKRMIVSVAELAFQCLQLDRDTRPAMDQVLRMLERIEKGTDEQEHLEEEDLHEIRISSNAHPPPSLSPENDGIGSLKNLKPPRFHQTL 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00729 652 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Bva11g00729 652 Pfam Protein kinase domain 328 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00729 652 SMART serkin_6 325 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00729 652 ProSiteProfiles Protein kinase domain profile. 325 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00729 652 SUPERFAMILY Protein kinase-like (PK-like) 310 612 IPR011009 -
Bva11g00729 652 MobiDBLite consensus disorder prediction 619 652 - -
Bva11g00729 652 Gene3D Transferase(Phosphotransferase) domain 1 402 625 - -
Bva11g00729 652 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 18 616 IPR044652 -
Bva11g00729 652 Gene3D Phosphorylase Kinase; domain 1 300 401 - -
Bva11g00729 652 Coils Coil 593 613 - -
Bva11g00729 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Bva11g00729 652 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 18 616 - -
Bva11g00729 652 CDD STKc_IRAK 331 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00729 Bva-Chr11 10245400 10248189 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00729 39 647 Receptor kinase-like Gene Family AT1G25390 48.232 4.88e-171 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bva11g00729 Pkinase 2.1e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00729 11 10245400 10248189 Bva11g00729 11 10245400 10248189 ECH