Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00728 ATGCCTGAAGTTTTAGCTTttcacttcttcttcctcttgttCTCACAGCTTCTGCAACTTGTCTTGGCTGGAAATGGAAATGGTACCCTTGGAAGCTGTCCATGCTCATTTGATTGTGGAAATCTTGGCGAAATTCGCTTTCCTTTCACCAGCACAAATCGCACGGACTGTGGCGTATTGGCTATACATGGTTGCGATGATCCAACAGCAGCTAAGAGCGTACAACTAGATTATACAGCTGCAGCAATAAGATGGCCTGATGTTGTAAGTGTTAATGGTTCTACCATTATCATCAAAAACAATGAACTGCAGAACGATTTGAGATCCAGAAATTGTGAAATTTTCAGCAATGCCCCCAGAAATCTATCAGCATGTTCAAGGATCCAGCTTCCAGTCAAAGACAAGGGTGATAGTAATGAcccttttacatttttaacaGCTGAGTTCCCCATTGAAGTACAAACATCTGATGTATATGCAAAGTCTTGCCTTAATGAAAGCAGTGAAGGTCTACTTTACAGCAATGGAAATCAAGACAAAGCAAAGCATAGAAGAGTTTGGAAACTGGCACTAGGTATTGGAATCCCCGGCACCGTCGTTTTAATGGTCATCCTGTGGTTCTTCCAACAAAGATATGCTCCTCCGGACGATGAAAGTGACGCTTATGATGAACCAGACCCACAGAGTAGCAGTGGCAACTTTGGGGTACCTGTCTTCTCATATAAGGAGCTAAAAGAAGCAACACAAAATTTTGATCCTAATAGAGAGCTTGGAAATGGAGGTTATGGGACTGTTTATTATGGAAAACTTCGAGATGGAAGGGAAGTTGCTGTCAAATGCCTATATGAGCACAATTACAGGAGAGTAGAACAATTCATGAATGAAATTGAGATCCTAAGGAGATTGCGTCACAGAAATCTGGTGTCCCTTTATGGCTGCACTTCACATCACAGCTGTGAATTACTGCTCGTGTATGAATATAACCCGAACGGCACTGTTGCTTCTCATCTCTATGGCGATTTAGCCAAACCTGGCATACTGCCATGGCCTATTCGAATGAACATTGCCATTGAGACAGCCAGTGCATTGGCTTATCTCCATGCTTCTGGCATCATTCACCGCGATGTCAAAACCAACAACATTCTACTTGACAACAATTTTTGTGTTAAGGTTGCAGACTTTGGACTTTCAAGACTTTTCCCCCTTGATGTCACCCATGTTTCTACATCTCCACAAGGAACCCCGGGTTATGTTGACCCTGAATATTATCGATGTTACCAGCTAACAGATAAGAGTGACGTGTATAGCTTTGGGGTTGTGCTCATTGAGTTGTTATCATCTATGTCACCAGTTGATTTGGAAAGGAAGAGGGATGAGGTTAACTTGTCTGACCTAGCAGTGAAGAAGATTCAAAATGGTGCATTTACTGAGCTGGTAGATCCTTCCCTTGGTTTTGATGTGGACACTGAAGTTAGAAGGATGATCAATTCCATGGCAGAATTGGCTTTTCAATGTTTGCAGTGGGACAAAGAATTGAGACCTTCCATGAATGAAGTTCTAGAGGCACTGATGAGGATTAAAAGTGGCAAGGATAAGCTTACGcatgaagaggaagaagatgcaCATGGTGCTGGGATGATGGACGGAAATATGCATCCACCATCACCGCGGTCACCGGATTGCGACGAGGTTGGGTTATTGAAGATCACAGAGCTATCCACTTCACCAAACAGTGTGACTCATAAATGGGATAGTGCAACCACCACACCTAATTTCAGTGGTTA 1784 0.4159 MPEVLAFHFFFLLFSQLLQLVLAGNGNGTLGSCPCSFDCGNLGEIRFPFTSTNRTDCGVLAIHGCDDPTAAKSVQLDYTAAAIRWPDVVSVNGSTIIIKNNELQNDLRSRNCEIFSNAPRNLSACSRIQLPVKDKGDSNDPFTFLTAEFPIEVQTSDVYAKSCLNESSEGLLYSNGNQDKAKHRRVWKLALGIGIPGTVVLMVILWFFQQRYAPPDDESDAYDEPDPQSSSGNFGVPVFSYKELKEATQNFDPNRELGNGGYGTVYYGKLRDGREVAVKCLYEHNYRRVEQFMNEIEILRRLRHRNLVSLYGCTSHHSCELLLVYEYNPNGTVASHLYGDLAKPGILPWPIRMNIAIETASALAYLHASGIIHRDVKTNNILLDNNFCVKVADFGLSRLFPLDVTHVSTSPQGTPGYVDPEYYRCYQLTDKSDVYSFGVVLIELLSSMSPVDLERKRDEVNLSDLAVKKIQNGAFTELVDPSLGFDVDTEVRRMINSMAELAFQCLQWDKELRPSMNEVLEALMRIKSGKDKLTHEEEEDAHGAGMMDGNMHPPSPRSPDCDEVGLLKITELSTSPNSVTHKWDSATTTPNFSG 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00728 594 SMART serkin_6 251 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00728 594 ProSitePatterns Protein kinases ATP-binding region signature. 257 279 IPR017441 GO:0005524
Bva11g00728 594 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 118 594 IPR044652 -
Bva11g00728 594 Gene3D Transferase(Phosphotransferase) domain 1 329 549 - -
Bva11g00728 594 MobiDBLite consensus disorder prediction 530 545 - -
Bva11g00728 594 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 118 IPR044652 -
Bva11g00728 594 MobiDBLite consensus disorder prediction 570 594 - -
Bva11g00728 594 Gene3D Phosphorylase Kinase; domain 1 223 327 - -
Bva11g00728 594 Pfam Protein kinase domain 254 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00728 594 SUPERFAMILY Protein kinase-like (PK-like) 234 521 IPR011009 -
Bva11g00728 594 CDD STKc_IRAK 257 526 - -
Bva11g00728 594 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 11 118 - -
Bva11g00728 594 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 118 594 - -
Bva11g00728 594 MobiDBLite consensus disorder prediction 530 594 - -
Bva11g00728 594 ProSiteProfiles Protein kinase domain profile. 251 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00728 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 371 383 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00728 Bva-Chr11 10241637 10244448 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00728 188 594 Receptor kinase-like Gene Family AT1G25390 58.554 4.12e-157 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bva11g00728 Pkinase 3.7e-49 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00728 11 10241637 10244448 Bva11g00728 11 10241637 10244448 ECH