Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00727 ATGACTCCAGTTTATGTGTTTGGATTCCTCATGTTTTCTTGCCTTGGGCAACTTCTCTCGGCTGTGTATGGAGAGGGAAATGGGTACCAAGGAAAGTGTCCACCTTTCTTTGATTGTGGATTTCTTAAGAAGATCCGATTCCCTTTCACAAAATCAGAAAAACCCAACTGTGGTTTATTTGCAATACAAAATTGTGATGATCCATGGGTGTTTAAAGAAATCCAACTACAGATTAATGGAACATGGTTTCCGGTTATAAACGTTGGTCAGCCTTCCCcttatattattcaaattagaGACCCAAATCTCTACAATTCTCTGCAATCCAGAAATTGTAATGTCTTAAGCAATAATTATACCCTTCCTTTCAGCTCTCCTTTCGcttcttttcatattcaatATAGTGTAACCATGTTCAGATGCAATTGCACCCTCAATGTCAAACCTCCAAATCcggaaatttttaattatcaatgcGCTCCCTACAATATCTACCACGGCAATTTAATCAATGAGTCCCGACGTTCTTTTGAAGCATGTTCAATGGTCCAGCTTCCAGCTAAAGACTTACCTGATGCCAAAGATCCATTCACATTTGTAACTGCTGATATCTCCATTGAAGTATCATTATCTGCAGATTGTGCAAATTGCCGCAAGAAAAAAGGCAACTGCCAACTTGACAGGAAAAGGAAGTTTTATTGTGTTGGAGGGAATAAGAGGTcagatttgaaattgaaactagGTTTAGCTATTGGACTCCCAATCATTCTAGTAATTGGCTTGCTCCTTCTAGCTctctacaaaagaaaatatgctcCCTCAGATACCCAATTCCAGTCAAGACATACCAACGCTGATCCTTACTCAAACATAGACCCAGAAAGTTGTGGGGTCTATTCTGGGGTTCCCCTCTTCTCCTACAAGGAACTTGAAGAAGCAACAAACAATTTTGACAGTAGTAGAAAACTTGGAGGTGGAGGTTTTGGGACAGTGTACTATGGAGAACTGCTAGATGGTAGGGAAGTTGCTATCAAGCGGTTATATGATCACAACAATAGGAGGGTAGAGCAGTTCATCAATGAAATTGAGATCCTCACTCGCTTGCGCCACAAGAATCTCGTGGTACTCCATGGCTGCACTTCACATCACAGCCATGAACTACTGCTAGTGTATGAATATATTCCAAAGGGCACTGTGGCTTCCCATCTCCATGGTGATTTAAGGCAGCGTGGCTTTCTGCCATGGCCTATACGGATGAAAATTGCCATAGAGACTGCTAGTGCATTGGCTTATCTCCATGCTTCGAACACAATACACCGAGATGTGAAAACCAATAATATTCTCCTTGACAATGACTTTTGTGTTAAAGTGGCTGATTTTGGACTTTCAAGACTTTTCCCTACTAATGTCACTCATGTGTTTACAGCTCCACAAGGAACACCTGGTTATGTTGATCCAGAATACAACAAATGCTACCAACTTACTAACAAGAGTGATGTATACAGCTTTGGAGTTGTACTCATTGAGCTGATATCGTCTATGCAAGCAGTTGATATGACTAGGCACAAGGAAGAGATAAACTTGGCAGATCTAGCCATAAAGAAGATTCAAAAAGGGGAATTGAATGAGCTTGTGGATCCTTCCCTTGGTTTTGAGTCAGATAACGAAGTTAAAAAGATGATAGTTGCAGTGGTAGAACTGGCTTTTCGGTGTTTGCAGCAGGACAGGGAGTTGAGGCCTGCAATGGATGAAGTGTTGGAGATGCTCAAGAGAATTGCTAGTGGAGAGGATGAGCTTGAACATCCAGAGGAAGCATATGCTCATGATGTTGGGATTTCAAACAGTAGCTTGCAGATGCAATCACAGCGACCAGCCCCATTGGACAGTGATGAGGTTGGGTCACTGAAGAATATGAAGAAATCACCAAACAATGTGACTGACAAATGGGAGAGTGAATCTACCACACCCAATATCAGTAGTTA 1982 0.3996 MTPVYVFGFLMFSCLGQLLSAVYGEGNGYQGKCPPFFDCGFLKKIRFPFTKSEKPNCGLFAIQNCDDPWVFKEIQLQINGTWFPVINVGQPSPYIIQIRDPNLYNSLQSRNCNVLSNNYTLPFSSPFASFHIQYSVTMFRCNCTLNVKPPNPEIFNYQCAPYNIYHGNLINESRRSFEACSMVQLPAKDLPDAKDPFTFVTADISIEVSLSADCANCRKKKGNCQLDRKRKFYCVGGNKRSDLKLKLGLAIGLPIILVIGLLLLALYKRKYAPSDTQFQSRHTNADPYSNIDPESCGVYSGVPLFSYKELEEATNNFDSSRKLGGGGFGTVYYGELLDGREVAIKRLYDHNNRRVEQFINEIEILTRLRHKNLVVLHGCTSHHSHELLLVYEYIPKGTVASHLHGDLRQRGFLPWPIRMKIAIETASALAYLHASNTIHRDVKTNNILLDNDFCVKVADFGLSRLFPTNVTHVFTAPQGTPGYVDPEYNKCYQLTNKSDVYSFGVVLIELISSMQAVDMTRHKEEINLADLAIKKIQKGELNELVDPSLGFESDNEVKKMIVAVVELAFRCLQQDRELRPAMDEVLEMLKRIASGEDELEHPEEAYAHDVGISNSSLQMQSQRPAPLDSDEVGSLKNMKKSPNNVTDKWESESTTPNISS 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00727 660 ProSiteProfiles Protein kinase domain profile. 317 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00727 660 SUPERFAMILY Protein kinase-like (PK-like) 299 599 IPR011009 -
Bva11g00727 660 Pfam Protein kinase domain 318 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00727 660 MobiDBLite consensus disorder prediction 636 660 - -
Bva11g00727 660 PANTHER WALL ASSOCIATED KINASE-LIKE PROTEIN 11 659 - -
Bva11g00727 660 MobiDBLite consensus disorder prediction 612 660 - -
Bva11g00727 660 Gene3D Transferase(Phosphotransferase) domain 1 394 602 - -
Bva11g00727 660 SMART serkin_6 317 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00727 660 Gene3D Phosphorylase Kinase; domain 1 292 393 - -
Bva11g00727 660 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Bva11g00727 660 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 11 659 IPR044652 -
Bva11g00727 660 MobiDBLite consensus disorder prediction 612 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00727 Bva-Chr11 10235784 10238574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00727 37 660 Receptor kinase-like Gene Family AT1G25390 48.341 4.31e-178 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Bva11g00727 Pkinase 3.6e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00727 11 10235784 10238574 Bva11g00727 11 10235784 10238574 ECH