Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00720 ATGTTTCTTCCATTTGTGCTGTTTTTTCTTGTCTGCAACTCTCTTGCACCTGTGAATTGTCTCAATAGTGAAGGCTTTGCACTTTTGTCACTCAAGCAGTCTCTTGAAGACCCAGAAGGGTCTCTGAGTAACTGGAATTCCTCTGATGACAACCCCTGTTCATGGAATGGGATTACATGTAATGGACTAAGAGTGATTTCTGTCAGTATTCCAAAGAAGAAACTTTATGGGTCTCTTCCTTCTGCTGTTGGAAATCTTTCTCAGCTCCGCCATGTGAATTTTAGGAACAATAAGCTCTTTGGAAGGTTGCCTGCGGAGCTCTTTGGAGCTCAGGGGCTGCAAAGTTTGGTGCTTTATGGGAATTCCCTTTCTGGGCCTGTTCCAAATGAGATTGGGAAGCTCAGGTACCTTCAAACTTTAGATTTATCACAAAATTTGTTCAATGGGTCATTTCCTGCTGCAATTACTCAATGCAAGAGACTCAAGTACCTTGTTCTCAGGCAAAACAATTTCACTGGTACTCTACCTGATAAATTTGGTAGTGATTTGCCTTCACTGGAAAGACTTGACCTTgcttataataatttcaatggGTCAATTCCTAGTAGCATGGGAAATCTATCAAGTTTGCAAGGAACTGTTGATTTATCTCATAATCATTTTAGTGGTTCAATCCCAGCTAGCCTTGGTAATTTGCCTGAGAGGGTTTACATTGATCTAACTTTCAACAATTTAAGTGGTCCAATACCCCAAAATGGCGCTTTAGTGAACCGAGGACCAACTGCTTTTATTGGCAATCCTGGTCTATGTGGCCCTCCATTGAAGGATCTGTGTTCTTCAGGTGCTAGTCCACCTACCTCATTACCACGTCTGCCAGATAACAGCCCACCTGAAAAGGGTTCTGGGAAAGGTTTGAGTAAAGGTGCTGTGATTGCCATTGTAGTGGGTGATGTAATTGGAATTTGTGTTTTGGGTTTGTTGTTCTCTTACTGCTACTCAAGGATTTCTGCTAGTAATCAGGAGAAGGATGAAAACGTTTATGGTTTtgggaaaggaagaaaagggaGGAAGGAGTGCTTATGCTTCAGGAGAGATGAATCTGAGACCTTATCTGAAAATGTTGAGCAGCATGATCTTATCCCATTAGATTCCCGGGTGGCCTTTGATTTGGATGAGCTTCTTAAGGCATCAGCTTTTGTTCTGGGAAAGAGTGGAATAGGAATTGTGTACAAAGTGGTGCTTGAAGATGGGCTTACCTTAGCTGTGAGAAGATTAGGGGAAGGAGGTTCTCAAAGGTTCAAAGAATTTCAAACTGAAGTAGAAGCAATAGGGAAACTAAGGCATCCTAATGTTGTAACTCTGAGAGCCTATTACTGGTCTGTTGATGAGAAGCTTCTCATCTATGATTACATACCCAATGGAAGCCTTGCTACAGCAATTCATGGGAAGCCAGGATTTGTCTCATTTACACCGATATCATGGTCTGTTCGGCTGAGAATCATGAAAGGAATTGCTAAAGGATTAGTCTACCTGCATGAGTTCAGTCCCAAGAAATATGTTCATGGGGATCTGAAGCCAAGTAATATACTTCTTGGCCATGACATGGAGGCCCACATTTCTGATTTTGGACTTGGAAGGCTTGCAAATATTGCTGGCGGTTCGCCAACCTTGCAATCCAACAGAGTAGCTGCAGAAAGACCCACTGAGAGACAAAAGAGCTTGTCCACTGAAGGTGCTTCTAATCTACTGGGAAATGGTTATCAGGCTCCAGAAACACTGAAAGCGGTGAAGCCATCACAGAAGTGGGATGTGTATTCATGTGGTGTGATTTTGCTGGAAATGATCAGTGGGAGGTTGCCCATAATCCAAGTGGGTAACTCGGAACTGGACCTTGTTCAATGGATTCAGCTCTGCATTGAGGAGAAGAAGCCACTGTCAGATGTGTTAGACCCGTATTTGGCTGAAGATGCAGATAGGGAAGAGGAGATTATTGCAGTTTTGAAGATAGCTATTGCCTGTGTCCAAAACAGCCCAGAAAAGAGACCCACAATGAGGCATGTACTTGATGCGTTGGATAGGTCATCGATATCCTCagattg 2099 0.4216 MFLPFVLFFLVCNSLAPVNCLNSEGFALLSLKQSLEDPEGSLSNWNSSDDNPCSWNGITCNGLRVISVSIPKKKLYGSLPSAVGNLSQLRHVNFRNNKLFGRLPAELFGAQGLQSLVLYGNSLSGPVPNEIGKLRYLQTLDLSQNLFNGSFPAAITQCKRLKYLVLRQNNFTGTLPDKFGSDLPSLERLDLAYNNFNGSIPSSMGNLSSLQGTVDLSHNHFSGSIPASLGNLPERVYIDLTFNNLSGPIPQNGALVNRGPTAFIGNPGLCGPPLKDLCSSGASPPTSLPRLPDNSPPEKGSGKGLSKGAVIAIVVGDVIGICVLGLLFSYCYSRISASNQEKDENVYGFGKGRKGRKECLCFRRDESETLSENVEQHDLIPLDSRVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNVVTLRAYYWSVDEKLLIYDYIPNGSLATAIHGKPGFVSFTPISWSVRLRIMKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHDMEAHISDFGLGRLANIAGGSPTLQSNRVAAERPTERQKSLSTEGASNLLGNGYQAPETLKAVKPSQKWDVYSCGVILLEMISGRLPIIQVGNSELDLVQWIQLCIEEKKPLSDVLDPYLAEDADREEEIIAVLKIAIACVQNSPEKRPTMRHVLDALDRSSISSD 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00720 699 Pfam Leucine rich repeat 160 221 IPR001611 GO:0005515
Bva11g00720 699 Gene3D Ribonuclease Inhibitor 17 74 IPR032675 -
Bva11g00720 699 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 5 697 - -
Bva11g00720 699 SUPERFAMILY L domain-like 20 276 - -
Bva11g00720 699 Gene3D Ribonuclease Inhibitor 75 281 IPR032675 -
Bva11g00720 699 Pfam Protein kinase domain 401 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00720 699 ProSitePatterns Serine/Threonine protein kinases active-site signature. 519 531 IPR008271 GO:0004672|GO:0006468
Bva11g00720 699 SMART serkin_6 400 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00720 699 MobiDBLite consensus disorder prediction 558 583 - -
Bva11g00720 699 MobiDBLite consensus disorder prediction 280 302 - -
Bva11g00720 699 SUPERFAMILY Protein kinase-like (PK-like) 400 691 IPR011009 -
Bva11g00720 699 Gene3D Phosphorylase Kinase; domain 1 364 470 - -
Bva11g00720 699 ProSiteProfiles Protein kinase domain profile. 395 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00720 699 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 5 697 - -
Bva11g00720 699 Pfam Leucine rich repeat N-terminal domain 22 61 IPR013210 -
Bva11g00720 699 Gene3D Transferase(Phosphotransferase) domain 1 471 698 - -
Bva11g00720 699 CDD STKc_IRAK 401 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00720 Bva-Chr11 10182779 10185624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00720 1 699 Receptor kinase-like Gene Family AT2G01210 68.194 0.0 976
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva11g00720 Pkinase 5.7e-34 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00720 11 10182779 10185624 Bva11g00720 11 10182779 10185624 ECH