Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00716 ATGGCCCTCCCATCTCATAATGGGGTCTCAAACGGCGTCACTTCACTTGATTCAGGGCTTGCCCGTCTTCATGAACTCGGTTACAAGCAAGAGCTCAAGCGTGACCTATCGATCTTTTCCaattttgccttttctttttctatcataTCAGTGCTCACTGGTATCACTACCCTTTACAACAGTGGGTTGACTTTTGGTGGTCCAGTATCTGTTGTCTATGGGTGGTTTATAGCTTCTGCTTTCACCATGGTTGTTGGGTTGTCAATGGCTGAAATTTGTTCATCTTACCCAACTTCTGGGGGTCTTTACTATTGGAGTGCCAAGCTTGCTGGCTCAGGATGGGCACCCTTTGCCTCCTGGATTACTGGTTGgTTCAATATCGTTGGGCAGTGGGCAGTGACAACAAGTGTAGATTATTCACTTGCACAGCTAATTCAGGTTATCATTCTCCTTAGTACCGGTGGAAAAAATGGAGGTGGATATGAGTCATCTAAGTATGTAGTTATTGGTTTTCATGGGGGAATTTTGCTTCTCCATGCTATAATAAATAGCCTTCCTATCTCAATATTATCATTCTTTGGACAGCTAGCTGCTTTCTGGAATCTTCTAGGTGTTTTTGTGCTTATGATTCTCATCCCCTCTGTTGCAACCGAAAGAGCTAGTGTCAAGTTTGTTTTCAGTCATTTCAATACTGATAATGGGAATGGAATCAACAGCAGAGCCTACATATTTCTCCTGGGACTTCTAATGAGTCAATATACCTTTACTGGGTATGATGCTTCTGCTCATATGACAGAGGAAACCAAGAATGCTGATAGAAATGGACCAAAAGGAATTATCAGTGCAATTGGGATTTCAATAATTGTGGGATGGGCTTACATACTTGGCATTACCTTTGCAGTTACTGATATCTCTTATCTTCTGAGTCAAAATAATGATGCTGGAGGGTATGCCATCGCTGAGATATTCTATCTAGCTTTCAAAAGAAGATATGGTAATGGAGTTGGGGGCATTATTTGCTTGGCAGTGATTGCAGTTGCCATATTTTTCTGTGGTATGAGTTCAGTTACCAGCAATTCAAGGATGGTTTATGCTTTTTCTAGAGATGGAGCCATGCCATTGTCATCATTATGGCATAGAGTTAACAGACAGGAAGTCCCCATAAATGCAGTTTGGTTATCTgcttttatatcattttgcaTGGCACTAACGTCTCTTGGAAGCATAGTGGCATTTCAAGCCATGGTGTCCTTAGCAACGATTGGCCTCTACATTGCTTATGCCCTACCTATCTTCTTCAGAGTGACTCTAGCACGCAAGTCTTTCGTCCCAGGGCCCTTCTACTTGGGGCGCTATGGGGTCCTTGTTGGTTGGGTTGCAGTTCTCTGGGTGTTGACCATCTCCATCCTCTTCTCATTGCCTGTTGCCTACCCAATAACCATTGAGAATCTCAATTATACCCCTGTTGCCATTGGATTCTTGTTGATCTTTGTAGTTTCTTACTGGATATTCAGTGGTCGGCATTGGTTTAAGGGACCTATaaccaatataaatatatg 1559 0.4137 MALPSHNGVSNGVTSLDSGLARLHELGYKQELKRDLSIFSNFAFSFSIISVLTGITTLYNSGLTFGGPVSVVYGWFIASAFTMVVGLSMAEICSSYPTSGGLYYWSAKLAGSGWAPFASWITGWFNIVGQWAVTTSVDYSLAQLIQVIILLSTGGKNGGGYESSKYVVIGFHGGILLLHAIINSLPISILSFFGQLAAFWNLLGVFVLMILIPSVATERASVKFVFSHFNTDNGNGINSRAYIFLLGLLMSQYTFTGYDASAHMTEETKNADRNGPKGIISAIGISIIVGWAYILGITFAVTDISYLLSQNNDAGGYAIAEIFYLAFKRRYGNGVGGIICLAVIAVAIFFCGMSSVTSNSRMVYAFSRDGAMPLSSLWHRVNRQEVPINAVWLSAFISFCMALTSLGSIVAFQAMVSLATIGLYIAYALPIFFRVTLARKSFVPGPFYLGRYGVLVGWVAVLWVLTISILFSLPVAYPITIENLNYTPVAIGFLLIFVVSYWIFSGRHWFKGPITNINI 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00716 519 TIGRFAM 2A0304: amino acid permease 23 513 IPR004756 GO:0006865|GO:0016021
Bva11g00716 519 ProSitePatterns Amino acid permeases signature. 66 97 IPR004840 GO:0006865|GO:0016021|GO:0055085
Bva11g00716 519 PANTHER AMINO-ACID PERMEASE BAT1 9 518 - -
Bva11g00716 519 Pfam Amino acid permease 36 493 IPR002293 GO:0016020|GO:0022857|GO:0055085
Bva11g00716 519 PANTHER AMINO-ACID PERMEASE BAT1 HOMOLOG 9 518 - -
Bva11g00716 519 Gene3D Amino acid/polyamine transporter I 30 511 - -
Bva11g00716 519 PIRSF AA_transporter 23 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00716 Bva-Chr11 10158470 10162003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00716 83 517 Organic Solute Cotransporters AT2G01170 79.310 0.0 675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00716 11 10158470 10162003 Bva11g00716 11 10158470 10162003 ECH