Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00694 ATGAGCAATAGAGAGAATATGGAAAAGGGTCTCTTGGAAAAAGATAGAGAGACAGAGGAAGAGACAAGCTTGGGCTTAACATGGGGTGTTTTTGCTCGAGAAGTGAAAGAGGTTGGTTCTATAGCAGGACCTATGGTGGCTGTGAATATGTCGCAATTTTTTCTGCAAATCATTTCAATGATGATGGTGGGTCACTTGGGTAAGCTTGCTCTCTCTAGCACCGCCATTTCCATCTCTCTCTGTGCTGTCTCCGGCTTCAGTGTGATCTTTGGGTTGTCGTGTGCACTGGAAACTCTATGCGGGCAGGCCTATGGAGCACAGCAATATcgaaaattttgtttgcaaATTTACACTGCcgtcttctctcttttcttagCTGGTCTTCCTCTGTCTCTTCTATGGATCTTTCTGGGGAAGCTGCTCATTTTTCTTGGTCAAGACCCTTTAGTTTCACAGGAAGCTGGTAAATTTGCTGTGTGTCTCATTCCTGCTCTCTTTGGTTATGGAACACTTCAGGCACTGGTCCGATACTTTTTGTTGCAAAGTTTGATAAGACCCCTTGTTATAAGTTCTTGTTTAACTGTATGCTTCCACGTAACTTTTTCTTGGATACTAGTTTTTAAGTCTGGTATAGGTAATCTAGGAGCAACTTTTGCCATTGGCACTTCATATTGGTTGAATGTAATTCTATTGGGACTGTATATGAAATTCTCTAGTGCCTGCTCAAGGACCCGGTTTCCAATTTCCATGGAGCTATTCCATGGGATTGGAGAGTTCTTTCGCTTGGCAATTCCTTCAGCTGCAATGATTTGCCTTGAATGGTGGTCATATGAGCTGATAATCTTGTTGTCTGGTCTTCTACCAAATCCAAAGCTTGAAACTTCTGTCTTATCCATCTGTATATCAGTCACCACAACAATCTATACTATACCAGAAGCACTCGGCTCATCTGCAAGCACAAGAGTTTCAAATGCATTAGGAGCTGGAAATCCACAAGCAGCAAGAGTTTCTGTGTTTGCTGCTATGTCTCTGGCAGCTTCAGTTGCAATTGTGGTGAGCTCAACCATTTTTGCATGCCGATATATTTTAGGTTATTTTTTTAGCAATGAGAAGGATGTGGTGGATTATGTCACAGATATGGCTCCTCTGGCAATTCTATCTGTTATTCTGGACAGCCTACATGGTTCCCTTTCAGGTATTGCTAGAGGATGTGGCTGGCAAGACTTAGGAGCATATGTGAACCTTGGTGCTTACTATATTTTTGGAATTCCAGTTGCTGCTTTATTGGGTTTCTGGGTAAATTTAAGAGCAAAGGGCCTTTGGTTTGGAATATTGGTTGGAGCATTTTGCCAGACAGTTCTGCTCTTTGTCATAACAAGTTGTACAGATTGGGAAAAGCAGGCTATTAAGGCAAGGGAGAGGATATTTCAGCGAAGACATTCAGAGGAAAAGGATTA 1457 0.4125 MSNRENMEKGLLEKDRETEEETSLGLTWGVFAREVKEVGSIAGPMVAVNMSQFFLQIISMMMVGHLGKLALSSTAISISLCAVSGFSVIFGLSCALETLCGQAYGAQQYRKFCLQIYTAVFSLFLAGLPLSLLWIFLGKLLIFLGQDPLVSQEAGKFAVCLIPALFGYGTLQALVRYFLLQSLIRPLVISSCLTVCFHVTFSWILVFKSGIGNLGATFAIGTSYWLNVILLGLYMKFSSACSRTRFPISMELFHGIGEFFRLAIPSAAMICLEWWSYELIILLSGLLPNPKLETSVLSICISVTTTIYTIPEALGSSASTRVSNALGAGNPQAARVSVFAAMSLAASVAIVVSSTIFACRYILGYFFSNEKDVVDYVTDMAPLAILSVILDSLHGSLSGIARGCGWQDLGAYVNLGAYYIFGIPVAALLGFWVNLRAKGLWFGILVGAFCQTVLLFVITSCTDWEKQAIKARERIFQRRHSEEKD 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00694 485 Pfam MatE 44 204 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva11g00694 485 Pfam MatE 265 427 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva11g00694 485 CDD MATE_eukaryotic 34 470 IPR045069 GO:0042910|GO:1990961
Bva11g00694 485 PANTHER MULTIDRUG RESISTANCE PROTEIN 14 472 - -
Bva11g00694 485 PANTHER PROTEIN DETOXIFICATION 14 472 - -
Bva11g00694 485 TIGRFAM matE: MATE efflux family protein 44 441 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00694 Bva-Chr11 10021052 10024285 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00694 11 10021052 10024285 Bva11g00694 11 10021052 10024285 ECH
Bva11g00694 11 10021052 10024285 Bva03g00711 03 4255462 4258244 ECH