Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00693 ATGAATGAACCAGAGAACAAGAGCCTCGAAGAGAGCCTATTACCAAAACAAAGAGTGGAAAGACCAGAGATTCAGGACCAGAGCATAACATGGGCTTCTTTCAGTCAAGAAGTAAAGAGGATTAGCTTCCTTGCAGGGCCTATGGTGGTTGTGATTTCTTCCCAGTATTTGATACAGGTTGTGTCGACAATGATGGTTGGTCACCTGGGtgagctttctctctctagcgCCTCCTTAGCCATTTCTCTCTCTGGGGTCACTGGTTTCAGTTTTCTGATGGGAATGGCCAGTGGACTGGAAACACTTTGTGGGCAAGCTTATGGAGCTCAACAATATCAAAAACTTGGAATGCAAACATACACTGCTATCTTTTCTCTCATACTGGTTTGCATCCCCCTGTGTTTCATTTGGACCAACAttgaaaatattcttcttttcataGGCCAGGATCCCCTCATTTCACATGAAGCTGGGAAATTCACAATCTGGCTTGTTCCGGGACTTTTCGCGTACGCGATCTTGCAACCATTGGTTAGATATTTCCAAATGCAAAGTTTGATTGCTCCCATGCTGATATGCTCTTGTGCTACTCTTTGTTTCCATATACCTCTTTGTTGGGTGTTGGTATTCAAGTCTGGACTGTATAATGTTGGTGGGGCTGTAGCAATTAGTATTTCATTGTGGTTAAATGTGATTATTCTTGGATTATACATGAGATACTCTTCTGCATGTGCAAAAACTCGTGCTCCCGTATCTATGGAGCTGTTCAAGGGAATCAGGGAGTTCTTTCGCTTTGCTATCCCTTCAGCAGTGATGATTTGCCTTGAATGGTGGTCATTTGAGATGCTGATCTTGATGTCTGGGCTATTACCAAATCCAAAACTTGAAACTTCTGTTCTCTCTGTATGTCTCAATACTATTTCAACACTCTATACTATTCCTTTTGGAGTTGGTGCTGCAGCAAGCACAAGGGTTTCAAATGAATTAGGAGCTGGGAATCCACAGGCTGCTCGCATTGCTGTGATGGCTGCAATGTCCATTGCAGTTGTAGAGACAAGCATAGTTAGCACAACCCTATTCGCCTGCCGCCATATTTATGGTTATACTTTTAGCAATGAGAAGGAAGTTGTTGACTATGTCACTGTCCTGGCTCCCCTGGTTTCTCTATCTGTCATTATGGACAGCTTACAAGGTGTTCTTTCAGGCATTGCTAGAGGTTGTGGATGGCAGCACCTAGGggcttacatcaatctaggtgCCTTCTACCTTTGTGGAATTCCAGTTGCTGCAGCATTGGGTTTCTGGGCACAGATGAGAGGAAAGGGCCTATGGATTGGTGTACAAGTTGGCTCTTTCGTGCAAACTCTTCTCCTTTCTATCATAACAAGTTGCACAAATTGGGAAGAGCAGGCAAACAAGGCAAGAAAGAGGCTGTTTGAAGGACAGTTTTCAGCAGACAATGGATTGGTATG 1472 0.4219 MNEPENKSLEESLLPKQRVERPEIQDQSITWASFSQEVKRISFLAGPMVVVISSQYLIQVVSTMMVGHLGELSLSSASLAISLSGVTGFSFLMGMASGLETLCGQAYGAQQYQKLGMQTYTAIFSLILVCIPLCFIWTNIENILLFIGQDPLISHEAGKFTIWLVPGLFAYAILQPLVRYFQMQSLIAPMLICSCATLCFHIPLCWVLVFKSGLYNVGGAVAISISLWLNVIILGLYMRYSSACAKTRAPVSMELFKGIREFFRFAIPSAVMICLEWWSFEMLILMSGLLPNPKLETSVLSVCLNTISTLYTIPFGVGAAASTRVSNELGAGNPQAARIAVMAAMSIAVVETSIVSTTLFACRHIYGYTFSNEKEVVDYVTVLAPLVSLSVIMDSLQGVLSGIARGCGWQHLGAYINLGAFYLCGIPVAAALGFWAQMRGKGLWIGVQVGSFVQTLLLSIITSCTNWEEQANKARKRLFEGQFSADNGLV 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00693 490 Pfam MatE 47 207 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva11g00693 490 Pfam MatE 268 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva11g00693 490 CDD MATE_eukaryotic 37 473 IPR045069 GO:0042910|GO:1990961
Bva11g00693 490 PANTHER PROTEIN DETOXIFICATION 23 477 - -
Bva11g00693 490 TIGRFAM matE: MATE efflux family protein 47 444 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Bva11g00693 490 PANTHER MULTIDRUG RESISTANCE PROTEIN 23 477 - -
Bva11g00693 490 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00693 Bva-Chr11 10014836 10018995 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00693 11 10014836 10018995 Bva11g00693 11 10014836 10018995 ECH
Bva11g00693 11 10014836 10018995 Bva03g00713 03 4263666 4266710 ECH