Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00688 ATGGCCGCGTTGCCGTCGTCGTCCGCAGCGGCCACTACCAACATCATGCTCGCCATCTTCGAGAAGAAGACGAACCAGGTCGATCTCTATCGTCCTCTTCGCAACTACGTAGCTTTCCATTACTCCGAACGCGAGGCCCAGAACCTCGAAGACGATCTCCAAACGCTTAAGCAACTCCGTACTGACCTCGAACGCCACTCTGATCCTGCCCTCCCCTCTCGTCGAGACCTCCTTCAATCCTATTACAAAGCTCTCTGCTTGGTCGAGACCCGTTTCCCTATTTCGCCTGACCAGGATCACGTTAACACTCTAAGCTTCGTCTGGTTCGATGCGTTTAAGCCCAAGCAGAAGGCAACGCAGCAGAGTATTCACCTGGAAAAGGCTGCTGTCTTGTTCAATTTGGGCGCTGTGTACAGTCAGATTGGGCTGTCTTATGACCGGAATACTGTTGATGGTCGGAGGCAGGCGTCCCATGCGTTCATTTCAGCTGCTGGGTCTTTTGCTTACCTGAAAGATAATGTCTGCTTGAAAGTGTCAGTTGGGGGTTCCACGACCGTCGATTTGTCAATGGAGTGTGCTGGGATGTTGGAGAGGCTGATGCTCGCTCAGGCACAGGAGTGTGTATTTGAGAATACCATTGCAAAAGGGAGTACCCCTGGTGTTTGTGCCAAGATCTCTAGGCAGGCGGGGCTGTACTATGAGGAAGCTTTAGCTGCACTAAATGTTGCACCTTTAAGCCAGCATTTTGATAAGGCTTGGATAGCTCATGTACAGTTAAAGGCAGCTCTATTCTATGCAGAAGCTTGCTATAGGTATGGGCTTGAGCTAcatgagaaagaagagataGCAGAGGAGATTGCTCGGTTGAAAAGTGGGGTCAATGCACTAACTGAGGCAAAGAAAAACTCCAAGGGTGCTGCAGCACAAATTCTGGATGCAATTAGCAAGTTAGAGGCCAATATTAACCAAAACCTAGAAAGGGCTGTGAAGGAGAATGATAGAGTTTACTTCATGAGGGTTCCAAACCCCAATACCTTACCACCTCTTCCAGCATTTTCCATGGTAAAGTCAATGGCGATGAATGAGGTTTTAGATGCAAGTAAGGAGAAGATGTTTGCAAGTCTTGTTCCTGATGGCAGTGCAAAGGCTCTTTCCAGGTACACTGAAATGGTAGATGACATTATAAGGACACAGGCTGAAAAATTACAACAAGCTAGTGAGCTAACTCGAGTTCGGCTTAAGGAAATGGATCTACCAGATTCTATTCTAGCTTTGGAAGGAAACTTTTCTCTACCAACAGAGCTCAAAGAAGATGTACAAGCTGTGCAGATCTGTGGGGGTCCTGCTGGTTTGGAATCTGAGTTGCAGCAACTCAAGGACCTCAGGAGGGTGAACCAAGAACTACTTGTCCAGGCTGAGGAACTATTGCAGAAAGAAGCAAGAGAAGATGCTCAATTTAGAAGCCAATTTGGACCAAAGTGGACTAGACCTCAATCTAGTACTCTGACAAAGAACTTGCAGGACAGGTTAAATAGGTTTGCAGGTAACTTGAAGCAAGCTGCAGAGAGCGATGGTAGGATTGAGCGTTCAGTTAGAGAACATGCAGCACTCATGTCAATCCTTGACCGCCGTCCGATTGAATCAGCACTTCCAAGTTTGGCAAGGCCCATAATGTCTTTGGATGCTAATGAAGATGCTATTGTGGGCTCCCTAAAGCAGAGTTTGAGGCAACTAGAAACTCTGGGAGCTCAAAGGGCTGGTCTTGAAGATATGCTTaaagatatgaaaagaaaGGATGATATATTACCAAAATTGATGACATCAACTGGCTCACATGAGGATCTTTTCAAGAAAGAGATAGCAAAATATGACCATATTTGTGAAGACATAGCTCAAAATATTGAGGCGCAAGAGCAGTTGTTGCTGCAGATCCAGGCCCAAAATGACGAGTTCTCTGCAATCTTTAATCTTGAAGATTACAGAGCATCGCGTGAAAAATGCTACAAGCAGATTCAAGGTGCCATAGCAAAATTTCgagaaataaaagataacatCAATGAAGGGTTGAAATTCTATGTTACTCTTCAGGATGCTATCACAAACGTAAAGCTGCAGTGCAGTGACTTTGTAATGACCAGAAACATCCAGTGCAGAGAAATGATTGAGGATGTTCAGAGACAACTGGCTGGTCTCAGTTTCCAGGATAACAAAAACACAGGTGCTTTAAACAATAACTACCCTCTGGTGGGACATCAAACTCAAAGATCCAATCCACCGACGGATCCTCAACCCCAAACCCCTTATTATCAGCAGCCACCGGAGGCTGATCGATCCCAAACACCTTATTTTCAGCAGTCACCGGTGGCTGGATACACTCACCGTCCTCCCCCATATGGTTCTGCACACCAACCTCCACCGCCATACCATGTTCCACCGGCAGCAGCTGCTCCATACCCTCCTCAGCCCCATCAGCAGCCACCGGTAAGCCATGAATATGGCCAACCGGCATATCCTGGATGGCGTGGTCCTTATTATAATGCACCTGCACAACAACCTTCATCAGTTCCTCGGCCTCCCTACACCATCCCTGGTCAATATCCTCCCCATCAAGGTGGCTACTACAGACAGCAATA 2633 0.4626 MAALPSSSAAATTNIMLAIFEKKTNQVDLYRPLRNYVAFHYSEREAQNLEDDLQTLKQLRTDLERHSDPALPSRRDLLQSYYKALCLVETRFPISPDQDHVNTLSFVWFDAFKPKQKATQQSIHLEKAAVLFNLGAVYSQIGLSYDRNTVDGRRQASHAFISAAGSFAYLKDNVCLKVSVGGSTTVDLSMECAGMLERLMLAQAQECVFENTIAKGSTPGVCAKISRQAGLYYEEALAALNVAPLSQHFDKAWIAHVQLKAALFYAEACYRYGLELHEKEEIAEEIARLKSGVNALTEAKKNSKGAAAQILDAISKLEANINQNLERAVKENDRVYFMRVPNPNTLPPLPAFSMVKSMAMNEVLDASKEKMFASLVPDGSAKALSRYTEMVDDIIRTQAEKLQQASELTRVRLKEMDLPDSILALEGNFSLPTELKEDVQAVQICGGPAGLESELQQLKDLRRVNQELLVQAEELLQKEAREDAQFRSQFGPKWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDGRIERSVREHAALMSILDRRPIESALPSLARPIMSLDANEDAIVGSLKQSLRQLETLGAQRAGLEDMLKDMKRKDDILPKLMTSTGSHEDLFKKEIAKYDHICEDIAQNIEAQEQLLLQIQAQNDEFSAIFNLEDYRASREKCYKQIQGAIAKFREIKDNINEGLKFYVTLQDAITNVKLQCSDFVMTRNIQCREMIEDVQRQLAGLSFQDNKNTGALNNNYPLVGHQTQRSNPPTDPQPQTPYYQQPPEADRSQTPYFQQSPVAGYTHRPPPYGSAHQPPPPYHVPPAAAAPYPPQPHQQPPVSHEYGQPAYPGWRGPYYNAPAQQPSSVPRPPYTIPGQYPPHQGGYYRQQ 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00688 877 Gene3D alix/aip1 in complex with the ypdl late domain 377 655 - -
Bva11g00688 877 Gene3D alix/aip1 like domains 10 376 IPR038499 -
Bva11g00688 877 CDD BRO1_Alix_like_1 16 371 - -
Bva11g00688 877 MobiDBLite consensus disorder prediction 742 759 - -
Bva11g00688 877 CDD V_Alix_like_1 377 713 - -
Bva11g00688 877 MobiDBLite consensus disorder prediction 770 787 - -
Bva11g00688 877 Coils Coil 279 299 - -
Bva11g00688 877 Coils Coil 39 66 - -
Bva11g00688 877 Coils Coil 314 334 - -
Bva11g00688 877 Coils Coil 578 598 - -
Bva11g00688 877 PANTHER PROGRAMMED CELL DEATH 6-INTERACTING PROTEIN-LIKE 8 856 - -
Bva11g00688 877 MobiDBLite consensus disorder prediction 798 826 - -
Bva11g00688 877 Pfam ALIX V-shaped domain binding to HIV 430 715 IPR025304 GO:0005515
Bva11g00688 877 ProSiteProfiles BRO1 domain profile. 14 409 IPR004328 -
Bva11g00688 877 SMART BRO1_2 15 399 IPR004328 -
Bva11g00688 877 MobiDBLite consensus disorder prediction 742 877 - -
Bva11g00688 877 Coils Coil 627 647 - -
Bva11g00688 877 Coils Coil 451 478 - -
Bva11g00688 877 Pfam BRO1-like domain 16 394 IPR004328 -
Bva11g00688 877 Gene3D alix/aip1 like domains 423 702 - -
Bva11g00688 877 PANTHER PCD6 INTERACTING PROTEIN-RELATED 8 856 IPR045251 GO:0071985
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00688 Bva-Chr11 9977524 9983965 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00688 11 9977524 9983965 Bva11g00688 11 9977524 9983965 ECH