Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00664 ATGTTGGCTTTTGGCGGGAAGAAGGTGCAGCAAGTGTTGGGTGGCAACGGTCTCGGTCAGGTTCTCACCGCTGTGGCCGTGACTCTCCTAGTCCGCCTCTTCTCCGGTCCAGGCCCAGTTATCTCGCCGGAAAATGAGGTTGAGGACGGCGACGATAGAGATGAGAAGGATGCCGATGATGGTGAGGCTCCGGTCTCCGGAAAAGTTTTCCCGGTCACAATCCGGTGGAGTGGAATAACGTGCTCACTTTCTGATAAATCCTCCAAGTCTGTGAGGTTTTTGCTTAAAAATGTGAGCGGAGAAGCAAAACCTGGAAGATTGTTAGCTATTATGGGGCCATCAGGTTCAGGAAAAACTACACTGCTTAATGTTCTCGCGGGTCAGCTGGCAGCATCACCCCGACTACATTTGTCTGGAATTTTGGAGTTTAATGGAAAGAATGCTTCAAAGAACACCTATAAGTTTGCATATGTGAGACAAGAGGATCTCTTTTTCTCACAGCTCACAGTGCGGGAAACGTTATCTCTTGCAATAGAACTCCAGCTTCCTGGCATCTCTTCAGTGGAAGAGAGAGATGAACATGTGAACAGTCTTCTGTTTAAACTAGGCCTGGTCAGTTGTGCTGATACCAATGTTGGTGATGCAAAAGTTCGTGGAATTAGTGGTGGGGAAAAGAAACGCTTATCACTGGCGTGTGAACTAATTGCAAGCCCATCTGTTATATTTGCTGATGAACCCACAACTGGACTTGATGCCTACCAGGCAGAGAAAGTCATGGAAACTCTCCAACAACTGGCAAAAGATGGGCATACTGTAATTTGCTCTATACATCAACCACGAGGTTCCGTTTACCATAAATTTGATGACATTGTCTTGTTATCAGAGGGTTCACTTGTTTATACTGGTCCTGCTGGTGATGAACCATTGGCATACTTCTCTAAGTTTGGGTATCACTGCCCTGAGCATGTAAATCCTGCTGAATTTTTGGCTGATCTTATATCCATTGACTATAGTTCTGCTGAGAGTGTCTATTCCTCTCAGAAAAGGATTGATGGTCTTGTTGAGTCATTCTCATACAGACTATCTACAATAATTTATGCAACTCCGATTACAAGAGAGGTGCTCTCCATAAGTGGAAAAAAAACCGCTACGAGAACTGTAGGTAGGAAGAGTGGAGGTTGGTGGAAACAATTTTGGTTGCTCCTCAGGCGAGCTTGGATGCAGGCTTCCCGTGATGGACCAACAAACATTGTTCGTGCAAATATGTCAGTTGCATCAGCAATTATCTTTGGGTCAGTTTTCTGGAGAATGGGTAGATCTCAGACTTCAATACAAGACAGGATGGGATTGCTTCAGGTTGCTGCAATAAACACAGCTATGGCTGCTCTCACAAAGACTGTTGGTGTGTTTCCAAAGGAGCGTGCAATTGTAGATAGAGAACGAGCAAAGGGCTCCTATGCCTTGGGTCCCTACCTGTTTTCAAAACTGTTGGCTGAGATTCCCATTGGGGCCGCGTTTCCATTAATGTTTGGTACTATTTTATACCCCATGGCACGTCTCCATCCTACCCTGACGAGGTTTGCAAAATTCTGTGGTATTATCACTATGGAATCTTTTGCCGCATCTGCAATGGGCCTGACTGTTGGGGCTATGGTTCCAACAACTGAAGCAGCAATGGCAGTGGGGCCATCTCTTATGActgtttttatagtttttggaGGCTATTATATCAATCCTGAGAATACCCCAATCATCTTCCGCTGGATTCCTAATGTTTCTCTGATTAGATGGGCCTTTCAGGGACTTTGCATCAATGAATTTCGTGGTCTCCAATTTGATCATCAGCATTCATTTGATATTCAAACTGGAGAACAGGCACTCGAGCGCATTTCCTTCGGAGGAACCCAGATTACAGATACAGTGGTAGCACAAAGTAGAATCCTGTTATTCTGGTATTGCACCACATACATTCTCCTTGAGAAAAACAGGCCCAAGTACCAGCAACTTGAACCGCCCCTTCATAACCACAACAAATCACATTTAAAACTTGAGGAGATAAACAATGACCAGCCACAGCCACAGCCACTTGAACCTTCACAAGAATCCAACCAGCAGCTTGAGTCACAATTTGATCCCATTGGACCTTTTATCCTAGAAGGTGCTAAGTA 2168 0.447 MLAFGGKKVQQVLGGNGLGQVLTAVAVTLLVRLFSGPGPVISPENEVEDGDDRDEKDADDGEAPVSGKVFPVTIRWSGITCSLSDKSSKSVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGILEFNGKNASKNTYKFAYVRQEDLFFSQLTVRETLSLAIELQLPGISSVEERDEHVNSLLFKLGLVSCADTNVGDAKVRGISGGEKKRLSLACELIASPSVIFADEPTTGLDAYQAEKVMETLQQLAKDGHTVICSIHQPRGSVYHKFDDIVLLSEGSLVYTGPAGDEPLAYFSKFGYHCPEHVNPAEFLADLISIDYSSAESVYSSQKRIDGLVESFSYRLSTIIYATPITREVLSISGKKTATRTVGRKSGGWWKQFWLLLRRAWMQASRDGPTNIVRANMSVASAIIFGSVFWRMGRSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERAIVDRERAKGSYALGPYLFSKLLAEIPIGAAFPLMFGTILYPMARLHPTLTRFAKFCGIITMESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYINPENTPIIFRWIPNVSLIRWAFQGLCINEFRGLQFDHQHSFDIQTGEQALERISFGGTQITDTVVAQSRILLFWYCTTYILLEKNRPKYQQLEPPLHNHNKSHLKLEEINNDQPQPQPLEPSQESNQQLESQFDPIGPFILEGAK 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00664 722 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 306 IPR027417 -
Bva11g00664 722 CDD ABCG_EPDR 71 302 - -
Bva11g00664 722 Pfam ABC transporter 95 247 IPR003439 GO:0005524
Bva11g00664 722 Pfam ABC-2 type transporter 397 607 IPR013525 GO:0016020|GO:0140359
Bva11g00664 722 PANTHER ABC TRANSPORTER G FAMILY MEMBER 7 1 675 - -
Bva11g00664 722 PANTHER ATP-BINDING CASSETTE TRANSPORTER 1 675 - -
Bva11g00664 722 Gene3D - 74 309 IPR027417 -
Bva11g00664 722 MobiDBLite consensus disorder prediction 682 714 - -
Bva11g00664 722 MobiDBLite consensus disorder prediction 686 710 - -
Bva11g00664 722 Pfam ABC-2 type transporter 277 334 IPR043926 GO:0140359
Bva11g00664 722 MobiDBLite consensus disorder prediction 41 66 - -
Bva11g00664 722 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 74 320 IPR003439 GO:0005524
Bva11g00664 722 SMART AAA_5 104 297 IPR003593 -
Bva11g00664 722 ProSitePatterns ABC transporters family signature. 220 234 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00664 Bva-Chr11 9844768 9851063 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00664 94 302 Calmodulin-binding Proteins AT2G36910 28.638 3.39e-11 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00664 11 9844768 9851063 Bva11g00664 11 9844768 9851063 ECH