Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00640 ATGATAATGGAGCCTAGTAAACAAGGGTCTTCGCCATCTTACTATAGCATTCTTGGGATCAACTCCGATTCCTCCGTTGATGATGTTAGGCGAGCTTATAGGAAGCTTGCTATGCAATGGCATCCAGATAGGTGGACGAGAACGCCATCTTTATTGGGCGAAGCAAAACGCAAATTCCAGCAAATTCAAGAAGCTTATTCAGTATTGTCTGATCACAAGAAAAGAACGATGTATGATGCTGGCTTGTATGACCCAGAAGACGAAGAAGATGAGGGCTTTTCTGATTTTGTGCAAGAAATGGTGTCTCTTATGGCTCAAGTAAGGAGAGAAGAAAAGCAGTACAGCATTGAGGAGCTGCAGACAATGTTAGCAGAAATGGTTCAAGGATTTGAGACTCCTTCATGGCATTGTGGACCCTCACTTGTTCATGAACGCCAGTGCTCAAAGAGGACCCGTTTGGATCCCACTAATATGATGGACAATGGCTTTAAATTGTATGAAACTAGAGGTTTTCCAATTAGGGAAGGTTTCATTAATTGCTTCTCTTCCTTGTA 554 0.4242 MIMEPSKQGSSPSYYSILGINSDSSVDDVRRAYRKLAMQWHPDRWTRTPSLLGEAKRKFQQIQEAYSVLSDHKKRTMYDAGLYDPEDEEDEGFSDFVQEMVSLMAQVRREEKQYSIEELQTMLAEMVQGFETPSWHCGPSLVHERQCSKRTRLDPTNMMDNGFKLYETRGFPIREGFINCFSSL 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00640 184 PANTHER PUTATIVE, EXPRESSED-RELATED 4 161 - -
Bva11g00640 184 ProSiteProfiles dnaJ domain profile. 13 82 IPR001623 -
Bva11g00640 184 Pfam DnaJ domain 14 79 IPR001623 -
Bva11g00640 184 Gene3D DnaJ domain 3 102 IPR036869 -
Bva11g00640 184 PRINTS DnaJ domain signature 15 33 IPR001623 -
Bva11g00640 184 PRINTS DnaJ domain signature 33 48 IPR001623 -
Bva11g00640 184 PRINTS DnaJ domain signature 54 74 IPR001623 -
Bva11g00640 184 SUPERFAMILY Chaperone J-domain 11 85 IPR036869 -
Bva11g00640 184 CDD DnaJ 14 71 IPR001623 -
Bva11g00640 184 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 161 - -
Bva11g00640 184 ProSitePatterns Nt-dnaJ domain signature. 59 78 IPR018253 -
Bva11g00640 184 SMART dnaj_3 12 74 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00640 Bva-Chr11 9717763 9719395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00640 3 80 C2H2 Transcription Factor Family AT1G74250 41.772 1.28e-13 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00640 11 9717763 9719395 Bva11g00640 11 9717763 9719395 ECH