Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00632 ATGGCATTGACCATCTCAGCCGCACAATCATGTGCTCTGTGTTTCAGTGGAAAGcaatttaaaaatgtgacAGTCTTTCAAGGCCAGAGAGTATATTGGGGCTTTTTGAATAGAAGAATGGGGTTTTATAGTTTTCTACCTTCGAACATCCCAAAAATGTATGCTCGGTTTAAGCATAAGCTATCAGATAAGTTGTTGGTGGAAATAAATCGACAAGGTGCAAGAAGCAGGTCGAAGTTGCATAGTAAGGTAGCAGCTCTCATGGATTATGATCTTTCTGATGTAATGGGAAATGGAAGAGCTGAAAAGAAATCTGATATGAATCTTAAAGATGCAGGAGTTGATTTGGACATCTATATAGCGTGTAAAAGATTTCCTTCAATTGTTTTGGGGAGTGCTCCTCAAGTAATTTTGTATGATGGGACCACATCTTACACTGAAACGAAAGGCTTTTTGGAAACACAGGATTTTAAACAagatttatcttattattcaGAGGCAAGGTGGGATCAACGTACTATCACTGAAGCATGGCCTTCTCTGTCTGCCGATGGATCTAGTGTAAAATCTTCCTCTGTGAGGGAAGATTCTTCCTCTTTAGGAGAAGATTCTCATAGCTGTCCTGTATCTCCTCATTCAATATCTTCTGTAGATGAAGTAAAATTAGATCATCAAGTCACATTGGAGGATAATCTTAATAAAGTGGAACTGCAGTCACCATTAGACCTTGCTTCTAATGAACTATTTCTTGACAAATCTATTGATTTCATACCTGGATTAAGTAAGAGGCACTGCAAGCAACTAGAAAACTGTGGCTTTCACACGTTGCGAAAATTGCTGCACCATTTTCCTCGAACATATGCTGACTTACAGAATGCACATGCTGAAATTACTGAAGGAcagtatttgatttttgttggaaaaatcTTATCTTCAAGGGGTGTCAAAGCTagttattcattttcatttcttgaggTTGTTGTGGGTTGTCAGATTGCACACAGTAAACCAGCTTCTCAGCCTGTGAATGATGATGCAATTAATGGGGCAAAGAAGACAATTTATTTGCatctgaagaaattttttcgTGGCAGCCGATTTACTTATAAACCTTTCCTGAAAAGTCTTGAAGAGAAATACCAAGAGGGAGATATAGCATGTGTCAGTGGCAAGGTGAGGACTATGCGTGCTAAAGATCACTATGAGATGAGAGAATATAATATTGATGTGCTTGAAGAGGAAAAGGATTTATCTTTTTGTGCCAGAGAGAGGCCATATCCTATCTATCCTTCAAAAGGAGGTCTGAACCCAGATTTTCTCAGGGATATTATTGCAAGGGCTTTACAAGCCTTGCCCATCAATGTTGATCCGATTCCTAAAGACATCACAAAGCAATTTGGATTGTTAAGTCTTAATGATGCATATGCTGGGATTCACAGACCAAAGGATATAAATGAAGCTGATGTGGCTCGCAAGAGGCTTATATTTGATGAATTCTTTTACTTGCAGTTAGGACGCTTGTTCCAGATGCTTGAAGGTCTTGGTACACAAATAGAGAAGGATGGATTGCTAGATAAATATAAGAgacaaaaagataatattctGTGTACAGATGAATGGTCATGTCTCACAAAGAAGTTTTTGGAGGCTCTTCCATATACCCTTACTTCAAGTCAACTGCATGCTATTTCAGAAATTATTTGGGATCTAAAAAGGCCAGTTCCCATGAATCGGCTTCTGCAGGGTGATGTTGGATGTGGAAAAACTGTGGTGGCTTTTCTGGCATGTATGGAGGTCATTGGCTCTGGATATCAGGCAGCTTTCATGGTTCCAACTGAGCTGCTTGCAATCCAACATTTCGGGCACCTGCTTAATTTGTTGGAGAATTTGGATGAGGTTGAGCACAAGCCCACTGTTGCTTTACTCACAGGTTCAACCCCACTAAAGCAATCGCGGATGATTCGTCAGGGCATCCAAACTGGAGAAATCTCAATGGTAATAGGAACTCACAGTTTGATATCAGAAAATGTGGAATTCTCAGCTCTACGCATTGCTGTGGTGGATGAGCAGCATCGCTTTGGTGTGATACAGCGAGGAAGGTTTAATAGCAAGTTATATTATACATCAGTTTCCGGGACAGAAGAAGCTAGTTCAGGTGGGTCAACAAAGAGTGATGCATATATGGCTCCACATGTTCTGGCCATGTCCGCTACTCCCATCCCAAGGACACTTGCTCTTGCTTTATATGGTGATATTTCACTGACAGAGATAACTGACTTACCTCCTGGAAGAATTCCTGTTCAAACATGCACCATTGAAGGAAATGACAGTGGATTTGAGGAGGTTTACAAGATGATGATGGATGAGTTGGAAGATGGGGGTAAAGTGTATCTTGTCTATCCAGTCATTGAACCTTCTGAACAGCTACCCCAACTTCGTGCAGCTTCTGCAGATCTTGAAGTTATATCACATCGGTTTAAAGGATACAATTGTGGTCTGTTAcatggaaaaatgaaaagtgatGAAAAGGAGGAAGCATTGAAAAGGTTTAAGAATGGAGAAATACGGATACTACTTTCTACACAAGTAATTGAGATTGGTGTTGATGTTCCAGATGCATCTATGATGGTTGTGATGAATGCTGAGAGGTTTGGAATTGCTCAATTGCACCAACTTAGAGGACGGGTTGGACGTGGAACAAGGAGGTCCAAATGTATACTAATAGGATCCACTACCAGTACCCTGAATCGGTTGAAAGTACTGGAACAATCATCAGATGGTTTTTACCTTGCAAACATGGACCTTTTATTACGTGGACCTGGTGACTTGCTTGGCAAGAAACAATCAGGACATCTGCCAGAATTTCCTATTGCTAGATTGGAAGTTGACGGAAATCTCTTACAAAATGCACACCTTGCTGCACTgAAAATCTTAAGTGCTTCCCATGATTTGGAGCAATTCCATGCACTTAAATTGGAGCTTAGCATGAGGCAGCCACTTTGCATACTAGGAGATTG 3017 0.3908 MALTISAAQSCALCFSGKQFKNVTVFQGQRVYWGFLNRRMGFYSFLPSNIPKMYARFKHKLSDKLLVEINRQGARSRSKLHSKVAALMDYDLSDVMGNGRAEKKSDMNLKDAGVDLDIYIACKRFPSIVLGSAPQVILYDGTTSYTETKGFLETQDFKQDLSYYSEARWDQRTITEAWPSLSADGSSVKSSSVREDSSSLGEDSHSCPVSPHSISSVDEVKLDHQVTLEDNLNKVELQSPLDLASNELFLDKSIDFIPGLSKRHCKQLENCGFHTLRKLLHHFPRTYADLQNAHAEITEGQYLIFVGKILSSRGVKASYSFSFLEVVVGCQIAHSKPASQPVNDDAINGAKKTIYLHLKKFFRGSRFTYKPFLKSLEEKYQEGDIACVSGKVRTMRAKDHYEMREYNIDVLEEEKDLSFCARERPYPIYPSKGGLNPDFLRDIIARALQALPINVDPIPKDITKQFGLLSLNDAYAGIHRPKDINEADVARKRLIFDEFFYLQLGRLFQMLEGLGTQIEKDGLLDKYKRQKDNILCTDEWSCLTKKFLEALPYTLTSSQLHAISEIIWDLKRPVPMNRLLQGDVGCGKTVVAFLACMEVIGSGYQAAFMVPTELLAIQHFGHLLNLLENLDEVEHKPTVALLTGSTPLKQSRMIRQGIQTGEISMVIGTHSLISENVEFSALRIAVVDEQHRFGVIQRGRFNSKLYYTSVSGTEEASSGGSTKSDAYMAPHVLAMSATPIPRTLALALYGDISLTEITDLPPGRIPVQTCTIEGNDSGFEEVYKMMMDELEDGGKVYLVYPVIEPSEQLPQLRAASADLEVISHRFKGYNCGLLHGKMKSDEKEEALKRFKNGEIRILLSTQVIEIGVDVPDASMMVVMNAERFGIAQLHQLRGRVGRGTRRSKCILIGSTTSTLNRLKVLEQSSDGFYLANMDLLLRGPGDLLGKKQSGHLPEFPIARLEVDGNLLQNAHLAALKILSASHDLEQFHALKLELSMRQPLCILGD 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00632 1005 MobiDBLite consensus disorder prediction 181 212 - -
Bva11g00632 1005 CDD DEXHc_RecG 494 761 - -
Bva11g00632 1005 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 456 761 IPR027417 -
Bva11g00632 1005 SUPERFAMILY Nucleic acid-binding proteins 249 328 IPR012340 -
Bva11g00632 1005 TIGRFAM recG: ATP-dependent DNA helicase RecG 271 972 IPR004609 GO:0003678|GO:0006281|GO:0006310
Bva11g00632 1005 Gene3D - 511 758 IPR027417 -
Bva11g00632 1005 PANTHER FANCONI ANEMIA GROUP M FANCM FAMILY MEMBER 14 1005 - -
Bva11g00632 1005 Gene3D - 767 938 IPR027417 -
Bva11g00632 1005 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 761 954 IPR027417 -
Bva11g00632 1005 SMART ultradead3 551 768 IPR014001 -
Bva11g00632 1005 PANTHER ATP-DEPENDENT DNA HELICASE HOMOLOG RECG, CHLOROPLASTIC 14 1005 - -
Bva11g00632 1005 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 778 936 IPR001650 -
Bva11g00632 1005 Pfam ATP-dependent DNA helicase RecG, domain 3, C-terminal 925 986 IPR045562 -
Bva11g00632 1005 SMART helicmild6 817 900 IPR001650 -
Bva11g00632 1005 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 569 757 IPR014001 -
Bva11g00632 1005 SUPERFAMILY Nucleic acid-binding proteins 370 452 IPR012340 -
Bva11g00632 1005 MobiDBLite consensus disorder prediction 181 195 - -
Bva11g00632 1005 Pfam Helicase conserved C-terminal domain 784 899 IPR001650 -
Bva11g00632 1005 Pfam DEAD/DEAH box helicase 576 740 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00632 Bva-Chr11 9647123 9659225 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00632 11 9647123 9659225 Bva11g00632 11 9647123 9659225 ECH