Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00628 ATGGAGGGTCTTCCTCAAGGTTACCGTCCGAACGTTGGTGTCTGTCTCATCAACGCCAATGATCAGGTTTTTGTGGCTTCTAGATTGAATGTTCCAGGAGCATGGCAAATGCCTCAGGGGGGAATTGAAGAAGGTGAGGAGCCCAAATCTGCTGCCATCAGGGAACTGCGAGAAGAAACTGGAATTGTGAATGCTGAAATAATTGCCGAGGTTCCAAAATGGTTGACTTATGACTTCCCACCTCCTGTGAAGGCAAAAGTGAATCGCCTCTGGGGAGGTGAATGGCATGGGCAGGCACAGAAGTGGTTTCTTATACGATTAACAAAAGATGACAGTGAGGTCAATTTAGCTACTGGCGAAGCAGATCCAGAATTTGCAGAATGGAAATGGGCAAGCCCTGAAGAAGTTATTGAGCAGGCAGTGGATTACAAGAGACCAACCTATGAAGAAGTTATAAGAACTTTCAAACCTTACTTTGATGGGAGTTCAATATCTGCCAAATGTAAATCAACGAAGTGGTG 521 0.453 MEGLPQGYRPNVGVCLINANDQVFVASRLNVPGAWQMPQGGIEEGEEPKSAAIRELREETGIVNAEIIAEVPKWLTYDFPPPVKAKVNRLWGGEWHGQAQKWFLIRLTKDDSEVNLATGEADPEFAEWKWASPEEVIEQAVDYKRPTYEEVIRTFKPYFDGSSISAKCKSTKW 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00628 173 PRINTS NUDIX hydrolase family signature 35 49 IPR020476 -
Bva11g00628 173 PRINTS NUDIX hydrolase family signature 49 64 IPR020476 -
Bva11g00628 173 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 1 159 - -
Bva11g00628 173 SUPERFAMILY Nudix 7 157 IPR015797 -
Bva11g00628 173 ProSitePatterns Nudix box signature. 40 61 IPR020084 GO:0016787
Bva11g00628 173 PANTHER BNACNNG74470D PROTEIN 1 173 - -
Bva11g00628 173 CDD Ap4A_hydrolase_plant_like 7 155 IPR022927 -
Bva11g00628 173 ProSiteProfiles Nudix hydrolase domain profile. 7 153 IPR000086 -
Bva11g00628 173 PANTHER UDP/ADP-SUGAR PYROPHOSPHATASE 1 173 - -
Bva11g00628 173 Hamap RNA pyrophosphohydrolase [rppH]. 2 160 IPR022927 -
Bva11g00628 173 Pfam NUDIX domain 8 150 IPR000086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00628 Bva-Chr11 9626481 9631217 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00628 11 9626481 9631217 Bva11g00628 11 9626481 9631217 ECH