Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00626 ATGAAGTACGCTGATCCAGAGCctccaaatttgaagaaatacgGTGTTCCTCTTTACTCGGTCGCATGGGTTCCACCGGAGGTTATCAGATTACAGCAAAATCCACCCTCTGATGAAGTATCCGGCGATGATGCCAAGTCGGATCCGCCTTCAGAGCCGGAGGTAGTGAAACGGCCCGGTGAGAAATACTTGGCCTTCGCTGGTGGAGGTGGAGAAGGCCGGAGCGGCATCCCCAATGCTCTTCTGGTTGCTCACTTCCATGTCGAATCTAATTTACTCTCTGATCAACCTGTGCGTAGGCTTGGAACTGATTCTGATTTGCCTTATAGAATGGCAGTTAACCCCAGAGGAGATGGTATTATTTGTGCAATGCCAAATGGTTGCAGATGGTTTGAATGGGATAGAAATGATAGTGcagaaattcataaattaagtttgaagAAATCTGAAAAGGTACTCACCCAGTTGGAGGATGTTGGACAGCAGTTAGCACTGGCATTTAATAATGATGGTACTGCATTAGCTACTGGTGGAGAGGATGGTAATCTTAGGGTTTTCAAGTGGCCTAGCATGGAAATTATTCACAATGAAACTAGAGCTCATTCTACTGTAAAAGACTTGCATTTCAGTTCTGATGGTAAATTGCTTGCTTCTTTGGGAAGTGCTGGCCCTTGCAGGGTGTGGGATCTGTCTTCAACAATGGTCTTAACTTCTCTACCAAATGAAAATCGTGAGGTTTTTAGCTCATGcagattttctcaaaataacaGTGGGACTCAGGTCCTGTATGTTGCTGCCATGTCAGACAAAGGTGGAAGCATTGTGACCTGGGATACAAAGACATGGGAAAGGACAGGATCAAAGCGTATTCTTCTTGATCCAATCTCTGCTTTGAATGTGACAGCCGATGGAAAGTTTCTTGCATGCGGAACAATTTCAGGAGATATCGTTGTCGTGAACTCAACAAATATGCAGATTTggacaaagataaaaaatgcTCACCTTGGCATAGTAACTGCATTGGCATTCTCTCCTGATTCAAGGGCCTTGGCTTCTGCATCCCTGGACTCAAGTGCGAGGGTGACAATAATGGaggataagaagaaaaatggagGATCAGGTTTGTGGATTACACTATTCATCATCTTTCTTGCTATAGTTGTGTACTGCCTGAGGCACGAAGGAATTGTGAAGTG 1196 0.4164 MKYADPEPPNLKKYGVPLYSVAWVPPEVIRLQQNPPSDEVSGDDAKSDPPSEPEVVKRPGEKYLAFAGGGGEGRSGIPNALLVAHFHVESNLLSDQPVRRLGTDSDLPYRMAVNPRGDGIICAMPNGCRWFEWDRNDSAEIHKLSLKKSEKVLTQLEDVGQQLALAFNNDGTALATGGEDGNLRVFKWPSMEIIHNETRAHSTVKDLHFSSDGKLLASLGSAGPCRVWDLSSTMVLTSLPNENREVFSSCRFSQNNSGTQVLYVAAMSDKGGSIVTWDTKTWERTGSKRILLDPISALNVTADGKFLACGTISGDIVVVNSTNMQIWTKIKNAHLGIVTALAFSPDSRALASASLDSSARVTIMEDKKKNGGSGLWITLFIIFLAIVVYCLRHEGIVK 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00626 398 MobiDBLite consensus disorder prediction 41 59 - -
Bva11g00626 398 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 58 361 IPR011047 -
Bva11g00626 398 PANTHER PROLACTIN REGULATORY ELEMENT BINDING PROTEIN 6 396 IPR045260 GO:0005085
Bva11g00626 398 Pfam WD domain, G-beta repeat 164 186 IPR001680 GO:0005515
Bva11g00626 398 Pfam WD domain, G-beta repeat 333 361 IPR001680 GO:0005515
Bva11g00626 398 Gene3D - 55 369 IPR015943 GO:0005515
Bva11g00626 398 ProSiteProfiles Trp-Asp (WD) repeats profile. 331 361 IPR001680 GO:0005515
Bva11g00626 398 PANTHER SEC12P-LIKE 2 PROTEIN-RELATED 6 396 - -
Bva11g00626 398 SMART WD40_4 149 187 IPR001680 GO:0005515
Bva11g00626 398 SMART WD40_4 323 363 IPR001680 GO:0005515
Bva11g00626 398 SMART WD40_4 94 134 IPR001680 GO:0005515
Bva11g00626 398 SMART WD40_4 285 320 IPR001680 GO:0005515
Bva11g00626 398 SMART WD40_4 190 229 IPR001680 GO:0005515
Bva11g00626 398 MobiDBLite consensus disorder prediction 30 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00626 Bva-Chr11 9615686 9620373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00626 163 310 Miscellaneous Gene Families AT5G08390 25.676 1.42e-06 48.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00626 11 9615686 9620373 Bva11g00626 11 9615686 9620373 ECH