Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00625 ATGGATCATCATCATCCCAATGGCGTCAACACCAACACCAACACCAACACCGCCATGCAACCTCATGGCTTGGAGATAGCCATTGATGAACTTGAAACACACCAAGTGGTGGCGCCACCCCATAAGAGCACTCTGCGCAAACTCAAAGGCAAACTGAAGGAAACTTTCTTCCCCGATGACCCTCTTCGCCAATTCAAGGGACAGTCATGGCAGAAGAAGCTGGTGTTGGGTGCTCAGTATTTGTTCCCAGTTCTTCAATGGGGTCCCAACTATAGCTTCAAGCTCTTGAAATCTGACATTGTTGCTGGCCTCACCATTGCCAGCTTGGCCATTCCTCAGGGTATCAGTTATGCCAAGCTTGCAAACCTTCCTCCTATTGTTGGACTCTATTCTAGCTTTGTTCCTCCTCTAGTGTATGCTGTTCTTGGGAGCTCAAGGGACTTGGCTGTGGGACCTGTCTCTATTGCTTCTCTTGTGATGGGATCCATGTTGAGGGAGGAAGTGTCTCCCACAGGAGACccttttctgtttcttcagCTGGCTTTTACTTCAACTTTCTTTGCTGGTATCTTTCAAGCTTCTCTTGGAGTTTtaagGCTGggatttattattgattttctaTCAAAGGCTATCCTTATTGGATTCATGGCTGGAGCTGCCTTGATAGTGTCTCTGCAGCAACTCAAGAGCCTCCTTGGAATTACACATTTTACCGACCAGATGGCCATAGTCCCTGTTATGAATTCTGTTTTTCATCATGTTGATGAGTGGTCATGGCAAACAATATTGATGGGTTTTTGCTTCTTGGTGTTACTTCTCTTGGCCAGACACGTTAGTATGAGGAATCCAAAGTTGTTCTGGGTCTCAGCTGGAGCTCCTCTTGTGTCTGTCATTGTCTCTACCCTCCTGGTTTTTGCAATCAAGGGTCAGAATTATGGCATCAGTGTCATTGGAAAACTGCAACAAGGATTAAATCCTCCGTCATTTAATATGCTGCGTTTTGGAGGAACCCATCTGGGTCTTGTCATCAAAACTGGCATCATGACTGGCATTTTATCACTCACTGAAGGTATTGCAGTAGGAAGGACATTTGCTGCTCTCAAGAACTACAAAGTGGATGGAAATAAGGAGATGATGGCAATCGGATTCATGAACGTGGTTGGCTCTTTCACTTCTTGCTACGTTGTAACAGGTTCTTTTTCGCGATCAGCTGTCAATCACAATGCTGGTGCAAAGACAGCAGTGTCCAATGCAGTAATGTCAGTGACAGTGATGGTGACACTTCTGCTTCTGATGCCATTGTTCAAATACACGCCTAATGTGGTACTGGGGGCGATCATACTTTCAGCAGTGATTGGCCTCATTGACATCCCTGCTGCATATAACATTTGGAAGGTTGACAAATATGATTTCCTCACTCTGTTGACTGCATTCTTTGGAGTTATAACCGTATCTGTCCAAGCAGGCCTTGGTATAGCAGTTGGGTTGgcaattctcaaaatccttctGCAAGTTACAAGGCCAAAGACAGTGATGTTAGGGCAAATGCCGGGGACATCCATATACCGCGATCTTCATCATTATAAGGAAGCTAGAAGAGTACCAGGTTTCCTCATTCTAAGCGTTGAGGCTCCCATCAATTTCGCCAACATCAACTATCTCAATGAGagGATCTTTAGATGGatagaagaatttgaagaagaagaagatagatTAAAGCAACAAAAGTCTAGCCTTCAGTTTTTGATTCTGGAAATGTCAGCTGTAAGCTCCGTAGACACAAGTGGTGTTTCACTCTTCAAGGAATTGAAATCAACATTGGAAAACAGAGGTGTTGAGTTAGTGTTGGTGAATCCTCTGGCTGAGGTAATTGAGAAGTTGAAAAAAGCAGACCAAGTTAATGACTTCCTCAGAGAAGATAGCCTTTACTTGACAGTTGCAGAGGCTGTTGCTTCACTTTCATCAGGAATGAAGAAGGGCCAAGCATCATCCATGCAAGATCTGCCACTTta 2012 0.4284 MDHHHPNGVNTNTNTNTAMQPHGLEIAIDELETHQVVAPPHKSTLRKLKGKLKETFFPDDPLRQFKGQSWQKKLVLGAQYLFPVLQWGPNYSFKLLKSDIVAGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLVMGSMLREEVSPTGDPFLFLQLAFTSTFFAGIFQASLGVLRLGFIIDFLSKAILIGFMAGAALIVSLQQLKSLLGITHFTDQMAIVPVMNSVFHHVDEWSWQTILMGFCFLVLLLLARHVSMRNPKLFWVSAGAPLVSVIVSTLLVFAIKGQNYGISVIGKLQQGLNPPSFNMLRFGGTHLGLVIKTGIMTGILSLTEGIAVGRTFAALKNYKVDGNKEMMAIGFMNVVGSFTSCYVVTGSFSRSAVNHNAGAKTAVSNAVMSVTVMVTLLLLMPLFKYTPNVVLGAIILSAVIGLIDIPAAYNIWKVDKYDFLTLLTAFFGVITVSVQAGLGIAVGLAILKILLQVTRPKTVMLGQMPGTSIYRDLHHYKEARRVPGFLILSVEAPINFANINYLNERIFRWIEEFEEEEDRLKQQKSSLQFLILEMSAVSSVDTSGVSLFKELKSTLENRGVELVLVNPLAEVIEKLKKADQVNDFLREDSLYLTVAEAVASLSSGMKKGQASSMQDLPL 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00625 670 Coils Coil 620 640 - -
Bva11g00625 670 TIGRFAM sulP: sulfate permease 83 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bva11g00625 670 Pfam STAS domain 528 649 IPR002645 -
Bva11g00625 670 CDD STAS_SulP_like_sulfate_transporter 528 646 - -
Bva11g00625 670 Pfam Sulfate permease family 96 475 IPR011547 GO:0016021
Bva11g00625 670 Gene3D STAS domain 507 655 IPR036513 -
Bva11g00625 670 PANTHER BNAA09G30120D PROTEIN 32 655 IPR030313 -
Bva11g00625 670 SUPERFAMILY SpoIIaa-like 531 653 IPR036513 -
Bva11g00625 670 Coils Coil 562 585 - -
Bva11g00625 670 ProSitePatterns SLC26A transporters signature. 125 146 IPR018045 GO:0008271|GO:0008272
Bva11g00625 670 ProSiteProfiles STAS domain profile. 527 653 IPR002645 -
Bva11g00625 670 PANTHER SULFATE TRANSPORTER 32 655 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00625 Bva-Chr11 9606788 9615148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00625 31 661 Inorganic Solute Cotransporters AT3G15990 66.351 0.0 853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00625 11 9606788 9615148 Bva11g00625 11 9606788 9615148 ECH