Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00621 ATGTCTGATTCATTCAATGCCTTCAAGCTTCATTGTCCCAGTTCAGACTCCAACCTTTCCCCTACAGCTTCCAGAATCACTGCACTTTCCTCCATTATCCCACTCCCCAACTGCTTCAAGCATCACCAGCTGGcagaagaaagaacaaatgcAGGGTTTCATGTTCAATCCCAGCAAAGCTCAAGGTGGACTCCAACCCCAGCACAGCTTTTAGTCCTTGAAGAATTGTATAGGCAAGGGAAAGTGTCACCGACAGCAGAACAAATCCAGCAAATAACTTTACAGCTCAGGAGATTTGGCAAGATTGAAGCCAAGAATGTCTTCTACTGGTTCCAAAATCACAAAGCAAGAGACCGTCAGAAACGTCGTCGTAGGGAGATGCAAAAAACTACTGCTGAAGATGCAGAAGAGTACAACATGGGAAGCTCAGAAAAACAAGAAGCTGATGCTGCAGGGTTGGGAGGAACAGGTTATGAAGTTAAAGAGACAAAGAAGTCGGCATCTTCAAACTGCAGTCGACTTGCAGATGAATCTGCTTCACTGGATATAGCAGAAAGAGAAGCAAATGGGTGGACTCGATTTAAGGAGAGAGAAACACTTGTTTTGAGAAGAAACACAGCAGAAAGAGAAGCTAAGTGCCAAAACAAGCAGATGCCATGCTTATCTCCCTATCACCTCAAAGACATATCTACTTCAACAGCTAAATCAGAAGCAGCACATAGAAGACCTAACCCTCAACTTTTGCCCCTTGAACTTTTTCCACTTAAGAGAGATGACCAAGAAGAAAATTCTCCCTTTAAAAGCAAATCTAGATTCTGTGCTTCTGCTTCTGTGGACTCTGAAATAACATCCAACCAGTTTTTTGAGTTTCTTCCTTTGAAAAACTTAAGAAACTA 896 0.4185 MSDSFNAFKLHCPSSDSNLSPTASRITALSSIIPLPNCFKHHQLAEERTNAGFHVQSQQSSRWTPTPAQLLVLEELYRQGKVSPTAEQIQQITLQLRRFGKIEAKNVFYWFQNHKARDRQKRRRREMQKTTAEDAEEYNMGSSEKQEADAAGLGGTGYEVKETKKSASSNCSRLADESASLDIAEREANGWTRFKERETLVLRRNTAEREAKCQNKQMPCLSPYHLKDISTSTAKSEAAHRRPNPQLLPLELFPLKRDDQEENSPFKSKSRFCASASVDSEITSNQFFEFLPLKNLRN 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00621 298 MobiDBLite consensus disorder prediction 231 252 - -
Bva11g00621 298 ProSiteProfiles 'Homeobox' domain profile. 56 121 IPR001356 GO:0003677
Bva11g00621 298 MobiDBLite consensus disorder prediction 119 154 - -
Bva11g00621 298 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 37 295 - -
Bva11g00621 298 MobiDBLite consensus disorder prediction 125 143 - -
Bva11g00621 298 SUPERFAMILY Homeodomain-like 55 123 IPR009057 -
Bva11g00621 298 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 37 295 IPR044555 GO:0003700|GO:0099402
Bva11g00621 298 Gene3D - 54 121 - -
Bva11g00621 298 SMART HOX_1 58 125 IPR001356 GO:0003677
Bva11g00621 298 Pfam Homeodomain 60 120 IPR001356 GO:0003677
Bva11g00621 298 CDD homeodomain 62 116 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00621 Bva-Chr11 9575370 9578210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00621 60 125 Wox Gene Family AT3G18010 78.788 1.36e-30 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bva11g00621 Homeodomain 4.9e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00621 11 9575370 9578210 Bva11g00621 11 9575370 9578210 ECH