Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00616 ATGGCTGCCCAATCGCAGTGCTGGTGGTCATGGAACAGAACGAGCTATTCAGACCCATTTACGCTTTCTTcaccttcatcttcttctttatgtaattcatCATTTCTGCATTCATTTCACACGGCTTATACTAAACGGCACCGTTTCACTGCTTGTTCTATAcaccattcttcttcttctcgtCCTACACCAAATTCGGGTCCCAGATTGAGCACTCCTATAAAATTAGTCGTTTCGGGTCCGAAATGTGAGAAGAATCTGACTGCCAATGGGAATGAAGAGGTCCCGTCGGTTTGTTTGACTCAAATCCAGAAGCGAAGAAGAGAGCCGTTGTCTCTGAAATCTTTATTTGAGAAGCGGTCTCTGTGGAGGAGGATACTATTCGCCTCCAGGAAAGTCAGAAGCATAATTTTGCTCAATGTCATCACTATTATTTATGCTAGTAACATTCCAGTTGTCAAAGAGGTTGAGGCAATTATGGACCCGGCGGCTTTCACAGTTGTGCGGTTTACAATTTCTGCCATTCCATTCATTCCATTAATACTTCAAGCACAGGGTGATACTCGCATCCGAAATGCAGGCATAGAGTTAGGTTTCTGGCTCAGTCTGGGATACCTTATGCAGGCACTTGGACTTCAAACCTCTGATGCTGGGCGGGCATCGTTTTTAGCTATGTTTACTGTAATTGTGGTTCCCTTACTTGATGGCATGCTAGGAGCAGTAATTCCTGCTCGAACCTGGTTTGGAGCTCTTATGTCCATTGTAGGAGTTGGAATGCTGGAATCCAGTGGTTCTCCTCCTTGTGTTGGTGATCTTTTGAACTTCTTAAGTGCTGTGTTTTTCGGCATTCATATGTTAAGAACTGAACATATATCTAGAAgcataaagaaagagaacttTCTGCCAGTCCTAGGATGCGAGATTTGTGTTGTTGCCTTGTTTTCTACAATTTGGTATATTGCTAGAGGCTACTTTAGTGGTATTGATCATCCCTGGCCGTCATCTTGGACATGGTCAATGCTTAGGGATTGGATGGTTGCTTTTCCATGGATCCCTGCACTTTATACAGGCCTATTCTCAACTGCACTATGCTTATGGGTAGAGATGGCTGCAATGCGTGATGTATCAGCCACAGAAACTGCCATAGTTTATGGATTGGAGCCAGTTTGGGGTGCTGGTTTTGCTTGGATTCTTCTTGGTGAAAGGTGGGGTTCCTTAGGATGGATCGGCGCCGCCCTTGTGCTAGGTGGAAGTTTAACAGTGCAGATATTTGGATCATCATCTCCAACCGAATCCACTGAAGAACAAAATAGAAGTACAAAAGATGGGAAGCATTGTGTGGCTAAGGAGATGGTGGAAGCCATTGACCCGGACAAGAACTTGATCACGTTCAGGATTATTGAGGGTGATCTTCTGGAGGACTACAAGACCTTCAAGGCCACACTTCAAGCTAGTCCAAAAGATAAGGGCAGTGTGGTGCATTGGACCTtggaatatgaaaagaaatatggtCATATAACTGACCCTCACACACTGTTGCAGTTCATAGCTGATATGAGTAAAGATATCGATGCTCACCTTACTCAGGCATA 1592 0.4221 MAAQSQCWWSWNRTSYSDPFTLSSPSSSSLCNSSFLHSFHTAYTKRHRFTACSIHHSSSSRPTPNSGPRLSTPIKLVVSGPKCEKNLTANGNEEVPSVCLTQIQKRRREPLSLKSLFEKRSLWRRILFASRKVRSIILLNVITIIYASNIPVVKEVEAIMDPAAFTVVRFTISAIPFIPLILQAQGDTRIRNAGIELGFWLSLGYLMQALGLQTSDAGRASFLAMFTVIVVPLLDGMLGAVIPARTWFGALMSIVGVGMLESSGSPPCVGDLLNFLSAVFFGIHMLRTEHISRSIKKENFLPVLGCEICVVALFSTIWYIARGYFSGIDHPWPSSWTWSMLRDWMVAFPWIPALYTGLFSTALCLWVEMAAMRDVSATETAIVYGLEPVWGAGFAWILLGERWGSLGWIGAALVLGGSLTVQIFGSSSPTESTEEQNRSTKDGKHCVAKEMVEAIDPDKNLITFRIIEGDLLEDYKTFKATLQASPKDKGSVVHWTLEYEKKYGHITDPHTLLQFIADMSKDIDAHLTQA 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00616 530 SMART Bet_v_1_2 412 530 IPR000916 GO:0006952
Bva11g00616 530 Gene3D - 414 529 IPR023393 -
Bva11g00616 530 SUPERFAMILY Multidrug resistance efflux transporter EmrE 194 263 - -
Bva11g00616 530 PANTHER OS03G0707200 PROTEIN-RELATED 47 444 - -
Bva11g00616 530 SUPERFAMILY Multidrug resistance efflux transporter EmrE 336 425 - -
Bva11g00616 530 Pfam EamA-like transporter family 270 419 IPR000620 GO:0016020|GO:0016021
Bva11g00616 530 Pfam EamA-like transporter family 135 259 IPR000620 GO:0016020|GO:0016021
Bva11g00616 530 PANTHER - 47 444 - -
Bva11g00616 530 SUPERFAMILY Bet v1-like 337 529 - -
Bva11g00616 530 Pfam Pathogenesis-related protein Bet v 1 family 440 529 IPR000916 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00616 Bva-Chr11 9547367 9554135 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00616 11 9547367 9554135 Bva11g00616 11 9547367 9554135 ECH