Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00614 ATGGCAGCCTCCACTTCCAGATTCTCAACAAGCTTCCCTTCAACATTACCATCGAAAAAATCACTACCCGCGAACCTGGGtttctcattttcatcattgccattcaataacaacaacaataacaataataataataatagtaatctTCTCAGTGTGAAATCTTCTGGCACTGCAAATTACGATGTCGTTGTGGATGAAGAAATGGACAAGATCAGGAGGCTTCAGAATGGCTCAGATGTTAGGGGCGTCGCGTTGGAGGGTGAGAAGGGGAGAACGGTGGACCTTACTCCTCCGGCGGTGGAGGCGATAGCGGAGAGTTTTGGAGAGTGGGTTATCAGTGGAATAGAGAAGGAGAGAGGGAACCCTGTGGAGACTGTGAGAGTGTCTCTTGGTAAGGATCCTCGAGTTTCTGGGGCAAAATTGAGCGTGGCTGTGTTTGCTGGGCTTGCTCGTGCTGGTTGCATTGTTTATGATATGGGATTGGCTACAACACCAGCTTGTTTCATGAGCACGTTGTTGCCACCCTTTGCTTTTGATGCTTCAATAATGATGACTGCATCTCACTTGCCTTATACTCGTAATGGCCTGAAATTTTTCACAAAGAGAGGCGGATTGACTTCTCCAGAGGTAGAGGAAATATGTGATAAAGCTGCTAGAAAATATGCGAACAGGATGACTAAAGTGTCTACCTTGCTTAACACTCCTCCAACTAGAGTTGATTTCATGAGCGTTTATGCAAAGCATCTAAGGGAAATTATCAAGGAAAGAGTGAATCATCCTTTGCATTATGACACTCCTCTTAAGGGATTTCAGATAATAGTAAATGCTGGGAATGGCTCGGGAGGATTCTTCACATGGGATGTGTTAGACAAGCTTGGTGCAGACACCTTTGGGTCTCTACATCTCAACCCAGATGGTATGTTCCCTAACCACATTCCCAACCCTGAAGACAAAACAGCCATGGCTTTGACCAGAGCTGCAGTGTTAGATAACTCAGCAGATCTTGGCATAGTTTTTGACACCGATGTCGATCGCAGCGGCGTGGTTGATAACAAGGGAAACCCCATCAATGGTGATAAACTCATTGCACTAATGTCTGCCATTGTGCTGAGAGAAAACCCAGGATCAACCATAGTCACTGATGCTCGTACTAGCATGGCACTCGCAAAGTTTATAACTGATAGAGGGGGCCAGCATTGTCTGTACCGTGTAGGTTACAGGAATGTGATTGACAAGGGAGTTCAGCTTAACAAGGATGGGATTGAGACACATCTTATGATGGAAACGTCTGGTCATGGTGCTCTTAAGGAGAATCATTTCCTTGATGATGGGGCATACATGGTGGTGAAAATTATCATTGAAATGGTACGAATGAAGCTTGCTGGATCAGAAGATGGGATCGGTAGTCTAATAGAAGATCTTGACGAACCACTAGAATCAGTAGAACTAAGGATTAATATCATCTCTGAACCTAGGCTCGCAAAAGCAAAAGGATCGGAGGCCATTGAAGCATTTCGAAACTATATTgagGAAGGGAGGCTCAAAGGGTGGGAATTGGACTCATGTGGGGATTGTTGGGTAAGTGAAGGCTGCCTTGTAGATACAAATGACAACCCTGCTGCCATTGATGCTCACATGTACAGGGCAAAACTTTCTGATGAAAGGAATGGAGAACATGGTTGGGTTCACATGAGGCAGAGTATTCATAACCCTAACATTGCTGTGAACTTGCAATCAAATGTACATGGGGGTTGCTGGTCAATGGCAAGAGCTTTTAGAGATGAgTTTCTCAAAGCTAGTGGAGTGGATAAATTCCTTGACATTAGtcaaattgataagtttgCTGAAAGTGGACGTGTAGCCTA 1865 0.4311 MAASTSRFSTSFPSTLPSKKSLPANLGFSFSSLPFNNNNNNNNNNNSNLLSVKSSGTANYDVVVDEEMDKIRRLQNGSDVRGVALEGEKGRTVDLTPPAVEAIAESFGEWVISGIEKERGNPVETVRVSLGKDPRVSGAKLSVAVFAGLARAGCIVYDMGLATTPACFMSTLLPPFAFDASIMMTASHLPYTRNGLKFFTKRGGLTSPEVEEICDKAARKYANRMTKVSTLLNTPPTRVDFMSVYAKHLREIIKERVNHPLHYDTPLKGFQIIVNAGNGSGGFFTWDVLDKLGADTFGSLHLNPDGMFPNHIPNPEDKTAMALTRAAVLDNSADLGIVFDTDVDRSGVVDNKGNPINGDKLIALMSAIVLRENPGSTIVTDARTSMALAKFITDRGGQHCLYRVGYRNVIDKGVQLNKDGIETHLMMETSGHGALKENHFLDDGAYMVVKIIIEMVRMKLAGSEDGIGSLIEDLDEPLESVELRINIISEPRLAKAKGSEAIEAFRNYIEEGRLKGWELDSCGDCWVSEGCLVDTNDNPAAIDAHMYRAKLSDERNGEHGWVHMRQSIHNPNIAVNLQSNVHGGCWSMARAFRDEFLKASGVDKFLDISQIDKFAESGRVA 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00614 621 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 245 353 IPR005845 GO:0005975
Bva11g00614 621 PRINTS Phosphoglucomutase/phosphomannomutase family signature 304 317 IPR005841 GO:0005975|GO:0016868
Bva11g00614 621 PRINTS Phosphoglucomutase/phosphomannomutase family signature 269 288 IPR005841 GO:0005975|GO:0016868
Bva11g00614 621 PRINTS Phosphoglucomutase/phosphomannomutase family signature 180 194 IPR005841 GO:0005975|GO:0016868
Bva11g00614 621 PRINTS Phosphoglucomutase/phosphomannomutase family signature 333 348 IPR005841 GO:0005975|GO:0016868
Bva11g00614 621 SUPERFAMILY Phosphoglucomutase, first 3 domains 357 459 IPR016055 GO:0005975|GO:0016868
Bva11g00614 621 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 357 457 IPR005846 GO:0005975|GO:0016868
Bva11g00614 621 SUPERFAMILY Phosphoglucomutase, first 3 domains 78 253 IPR016055 GO:0005975|GO:0016868
Bva11g00614 621 Gene3D - 75 230 - -
Bva11g00614 621 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 73 222 IPR005844 GO:0005975|GO:0016868
Bva11g00614 621 CDD PMM_PGM 74 596 - -
Bva11g00614 621 Gene3D - 271 349 - -
Bva11g00614 621 PANTHER PHOSPHOHEXOSE MUTASE 47 619 - -
Bva11g00614 621 PANTHER OS06G0476200 PROTEIN 47 619 - -
Bva11g00614 621 Gene3D - 350 467 - -
Bva11g00614 621 SUPERFAMILY Phosphoglucomutase, first 3 domains 244 355 IPR016055 GO:0005975|GO:0016868
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00614 Bva-Chr11 9531299 9536206 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00614 11 9531299 9536206 Bva11g00614 11 9531299 9536206 ECH