Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00613 ATGGAGAACGTCCTGGGTCTTCTCAAACTTCGTATTAAAAAGGGTATTAACCTCGCGATTCGCGACACTCGTAGCAGTGACCCTTATGTTGTTGTCCACATGGCTGAGCAGAAACTGAAGACTCGTGTTGTGAATGATAACATCAATCCCGAGTGGAATGAAGAATTGACACTTTCTGTTAGGGATGTGAACATTCCAATTCAGCTAACAGTTTTTGACAAGGATACCTTCAGTGTGGATGACAAAATGGGGGATGCAGAAATAGACATGAGACCCTATGCTGAGTGTGTGAAGATGGGCTTGGATCAAAGTCTCCCAGATGGGACTGCAGTGAAGAAGGTGATACCCTGCAGGAGCAACAGCCTAGCTGAGGAGAGTCCCTGTGTTTGGAGAGATGGAAAACTTATCCAGGAAATGATTCTTAGGTTGAAAAATGTGGAGTGTGGAGAAATAGTTGCTGAAATTGAGTGGGTTGACATCCCAGGTTGTAAGGGCTTAGCAGATGTTGAAATTATCGCATA 521 0.4434 MENVLGLLKLRIKKGINLAIRDTRSSDPYVVVHMAEQKLKTRVVNDNINPEWNEELTLSVRDVNIPIQLTVFDKDTFSVDDKMGDAEIDMRPYAECVKMGLDQSLPDGTAVKKVIPCRSNSLAEESPCVWRDGKLIQEMILRLKNVECGEIVAEIEWVDIPGCKGLADVEIIA 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00613 173 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 105 IPR035892 -
Bva11g00613 173 Gene3D C2 domain 2 162 IPR035892 -
Bva11g00613 173 CDD C2_ArfGAP 5 149 - -
Bva11g00613 173 Pfam C2 domain 7 92 IPR000008 -
Bva11g00613 173 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Bva11g00613 173 SMART C2_3c 7 102 IPR000008 -
Bva11g00613 173 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Bva11g00613 173 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 10 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00613 Bva-Chr11 9528266 9530183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00613 38 167 C2H2 Transcription Factor Family AT1G70790 66.412 1.10e-59 181
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00613 11 9528266 9530183 Bva11g00613 11 9528266 9530183 ECH
Bva11g00613 11 9528266 9530183 Bva13g01310 13 6728354 6730046 ECH
Bva11g00613 11 9528266 9530183 Bva04g00616 04 4063904 4069184 ECH