Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00610 ATGAAAAGGGAGCATCATCAGCTTCGTCCGAGTTCTGTAGACCCATCCATGGCCTCCAGCTCCATGGGCGGCGGAGGAGCTGCAAGAGTGTATTCTGTGGAGAACGCCGCCACCTCCACAGGAAAATCGAAGATTTGGGATGAGCCGGCACAAGACGGCGGCATGGACGAACTTCTGGCTGTGCTCGGGTACAAGGTAAGGTCGTCGGATATGGCGGAAGTGGCCCAGAAGCTGGAACTGCTTGAGGAAGCTATGGGGAGTGTTCAAGATGGTATCTCTCAGCTCGCATCGGAAACCGTCCATTACAATCCCTCCGATCTGTCTACCTGGGTCAAAAGCATGCTCTCTGAGCTGAACCCAACTCCCAATTTCCCAGGTCCACCTTCTTCCCTCGACGATTCCTTCTTGGCTCCGGCGGAATCATCCCCCATAACCTCCATTGATTTCACCGACCATAGCCCGAACCAGCATATGAAACATCCTTTTGAAGATGCTTCTTCTTCAGATTACGATCTCAAAGCTATTCCAGGTAAGGCAATCTATAGCCAAACCCAAACACAAACCCAGCACCTTGAATCTCCCTCTTCCAGAGATTCCAAACGCTTGAAATCCTCAAACCCAGAATTGGTCCCACCCTCTTCTGTCGGGGCTTTTGGTATGCCCAGTGAGTCAACTCGCCAAGTGGTCCTCGTGGATTCACAAGAGAACGGAATTCGATTAGTTCATGCATTGATGGCTTGCGCCGAAGCTGTTCAACAGAACAATTTCAACATCGCACAAGCTCTGGTGAAGCAGATCGGATTCTTAGCAGCTTCTCAAGCTGGTGCCATGAGAAAGGTTGCTACCTACTTTGCGGAAGCACTTGCCAGAAGAATCTACAGGCTCTACCCAGAAACCCCACTTGACCATTCCTTTTCCGATATGCTTCAGCTTCATTTCTACGAGACTTGCCCTTACCTGAAATTTGCTCACTTCACAGCAAACCAAGCCATTCTCGAAGCCTTCGAAGGCAAAAAGCGAGTCCACGTAATCGATTTCAGCATGAACCAGGGGATGCAATGGCCGGCTCTGATGCAAGCTCTCGCTCTCCGACCGGGAGGCCCACCTGCTTTCCGGTTAACCGGAATCGGACCACCCGCCCCGGATAATTCGGACCATCTTCAGGAAGTGGGTTGGAAACTCGCCCAATTAGCAGAAACAATCCACGTTGAGTTCGAATATAGAGGCTTCGTTGCCAATAGCTTAGCAGACCTCGACGCGTCCATGCTCGAACTTAGACCGAGTGAGGTTGAGTCGGTTGCGGTTAACTCGGTATTCGAATTGCACAAACTCTTGGCCCGACCGGGAGCCATTGAGAAGGTCTTGGCTGTGTTGAAGCAGATGAAACCGGAGATCGTGACCATCGTCGAGCAAGAAGCGAACCACAATGGTCCGGTTTTCGCGGACCGATTCACCGAGTCACTGCACTATTACTCGACTCTATTTGACTCGTTGGAGGGTTCGGCCATCACCCAAGATAAGATCATGTCGGAAGTGTACCTGGGGAAGCAAATCTGCAATGTGGTAGCCTGCGAAGGAGTGGACCGGGTCGAGCGGCACGAGACCCTGACTCAATGGAGGACTCGGTTGGGCTCAGCCGGGTTCATTCCGGCTCACCTCGGTTCAAACGCGTTTAAGCAAGCCAGCATGTTACTTGCTCTGTTTGAAGGTGGGGATGGATACAGAGTGGAAGAGAACGACGGGTGCTTGATGCTGGGCTGGCACACTCGCCCACTAATTGCCACCTCGGCGTGGCAACTCAGAAAAAACTG 1811 0.5213 MKREHHQLRPSSVDPSMASSSMGGGGAARVYSVENAATSTGKSKIWDEPAQDGGMDELLAVLGYKVRSSDMAEVAQKLELLEEAMGSVQDGISQLASETVHYNPSDLSTWVKSMLSELNPTPNFPGPPSSLDDSFLAPAESSPITSIDFTDHSPNQHMKHPFEDASSSDYDLKAIPGKAIYSQTQTQTQHLESPSSRDSKRLKSSNPELVPPSSVGAFGMPSESTRQVVLVDSQENGIRLVHALMACAEAVQQNNFNIAQALVKQIGFLAASQAGAMRKVATYFAEALARRIYRLYPETPLDHSFSDMLQLHFYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAPDNSDHLQEVGWKLAQLAETIHVEFEYRGFVANSLADLDASMLELRPSEVESVAVNSVFELHKLLARPGAIEKVLAVLKQMKPEIVTIVEQEANHNGPVFADRFTESLHYYSTLFDSLEGSAITQDKIMSEVYLGKQICNVVACEGVDRVERHETLTQWRTRLGSAGFIPAHLGSNAFKQASMLLALFEGGDGYRVEENDGCLMLGWHTRPLIATSAWQLRKN 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00610 603 MobiDBLite consensus disorder prediction 153 167 - -
Bva11g00610 603 SMART DELLA_2 56 128 - -
Bva11g00610 603 PANTHER DELLA PROTEIN GAI1-RELATED 35 600 IPR030006 GO:0003712|GO:0005634
Bva11g00610 603 MobiDBLite consensus disorder prediction 1 27 - -
Bva11g00610 603 Pfam GRAS domain family 240 599 IPR005202 -
Bva11g00610 603 Gene3D - 54 118 IPR038088 -
Bva11g00610 603 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 35 600 IPR005202 -
Bva11g00610 603 MobiDBLite consensus disorder prediction 144 168 - -
Bva11g00610 603 Pfam Transcriptional regulator DELLA protein N terminal 56 122 IPR021914 -
Bva11g00610 603 MobiDBLite consensus disorder prediction 181 217 - -
Bva11g00610 603 ProSiteProfiles GRAS family profile. 231 599 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00610 Bva-Chr11 9499611 9501931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00610 42 603 GRAS Transcription Factor Family AT1G14920 69.244 0.0 779
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bva11g00610 GRAS 1.3e-135 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00610 11 9499611 9501931 Bva11g00610 11 9499611 9501931 ECH