Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00604 ATGTTTGCCTCAACGATTTTGACACCCTCCACGTTGAAAGTCTCTCAGTTCGTTGGACACATACCAAAACCCCACTTAGGAACTCTTCCCAATGGAAGCAGAAAAAGCCCAAGAAGTAGAGTGGCAGTGTTTTCTAGAGTGGTTCATCGTCAAAATCGTAGCTTTAGCCCCATATCGCACACAAAGCCTGCAGTGGTCGCTAGGGTCAGTAGTGGTGGCGATACCTCTGCAGATTATACCGCACAACAGTCTTCACCTCctGACATTGAAGATGTAACTAGTAGCTCTCCTGGCATTGGTGAAGGTTATGTGGCCTTGTTTGCTCGTATGTTAGGCCTAGATCATGAGCCCCCTGATAGAGAACAGGCTATAATTACTCTCTGGAAATACTCACTTGGAGGAAAGAAGTGTAGTGATGCTATAATGCAGTTTCCGAGTTGCATTAATCTTACTGTAAATCTTCTTAGATCAGATTCTAGTTCGGCATGTGAAGCAGCTGCAGGCCTTTTACGTTCACTGTCTTCAGTCAATCTGTACAGGAATTCTGTAGCAGATAGTGGAGCTATAGAAGAGATAAATGGATTGCTTAGAAGACCTTCATTGGCTCCTGAGGTAAAGGAGCAGAGTATGAGTGCATTGTGGAATTTATCTGTAGATGAGAAGATCCGAGTTAAACTTGCAAACGAAGATATTATACTGCTAATTATCAAGTACCTAGATGATGAGGATATAAAGGTGAAGGAAGCTGCTGGGGGCGTTTTGGCAAATTTAGCACTGAGCCATGTTAACCACAAGATGATGGTGGAATTAGGTGTCATACCAAAATTGgCAAGGTTCTTATCATCCGATGCAGAAGGATCTACAATCACTAGAAAGGAAGCAAGGAATGCATTGCTGGAACTTGTCAAGGATGAATATTATAGAATTCTTGTCATTGAGGAGGGTCTGGTTCCTGTGCCACTGGTTGGTTCTGCAGCCTTTAAGTCATTAAGCCCGGGTTTACATGCATGGCCCACATTACCAGATGGTACAGAACTTGAACGAACTTCTAAAGAACCTTCCAGATTTGGTGCATCAGAATTACTTCTTGGATTAaatattgatgaaaaaaatgctaacatagaagaatcaaaaattaatgcaaTCATTGGGCGGACACAACAAAAATTCCTTGCACGTATTGGGGCTATAGAAGTGGAAGGCCAAAAAATACCTGATTCAGAATGCTCCAATAACCAGGGAATTACACTTCTACCATGGATGGATGGTGTTGCTCGCCTGGTACTGATCCTCGAACTAGAAAATAAGTCTGCCATTTCAAGGGCTGCAGAGTCAATTGCTGATGCATCTATAAATGAAGATATGCGTATTGCATTCAAGGAAGCTGGAGCAATCAAGCATTTAGTTCGACTTCTGAATCATAATGATGATGCTGTCAGATTGGCTGTAACTCGAGCTTTAGAGAGGTTGTCAATCAGCCATGTTATTTGCCAATCAATTGAAGCTGAGGGTGTCTTAGGTCCTTTAGTTGATATTGTGAATCACTCTCAGATTTCTGAAAATGTAGTGGAAAAGTCACTGCATATACTTGCTCGGATATTAGATCCCAGTAAAGAGATGATATTGAAGTTTTATGATGGATCAGTAAATGGATCTAAGAAGACGTTGAATGGAGCAAAAGACAATGCTGTTCCAGTGGGGTTAATTGGTACCAAACAAGCCATATCAAAAGGAATCAAcagTTCTGGCAGGAATGATGTACTGGATTCTACATTCATTGCCCGAATAGTTGAGATTCTGAAGTTCTCTTCTTCCAGTTTACAAGCCAAAGCTGCTTCTGTGCTGGAGTTTGTGATACTGACTGACCCAACTATGGTCTCTCTTATTTCTGTGAATATAGAATCTGGTCTTGATGCTGTTTTCCAGCAAAAGATTTTGAGGAGTTCTGACGAAGAATCAGATCTAGACTATCTACCACCAGAAAAATATGCCATTGCAGTTGAAGAAGCTGGTCTTGCAATATCTGCAACATCCAGGTTAATGACAAAACTGCTTGACTCTGAGCAATTTCGCCAGACGATAAATCTCCCCCATTTCACTGGTTTGCTTCGCCAAATCCTCAAGTCCAACATCCCCCTTCACAGCAAAGACTGGATAGCAGCTTGCTTGATTAAACTTACCTCTTTCTCTGGTTACAACCTAGATTTCGATCCAATCAATGTGGAAGTTACACTGTACGAGACAATTCCAAGACTTatagaacaaataaaattttcattctccCCAGAAACACAGGAAGCTGCTGTTGTAGAACTCAACAGAATAATATATGAAGGAGTAGTAGATTCTACGCGAGCCATTGCTTCCAAGGGCGCGATATATCCATTGGTTAAGCTGATCGAAGAAGGCAGTGGAAGGGCTGTTGAAGCAAGCTTAGCTATACTGTATAATCTGAGCATGGACAGTGAGAACCATTCTGCAATTCTCGCTGCCGGAGCTGTCCCGGCGCTAAGAAGAATTGTTCTATCTCAGAGACCACAATGGGAACGAGCACTGCATTTGCTCAGGAGTTTGCCAACATG 2582 0.4117 MFASTILTPSTLKVSQFVGHIPKPHLGTLPNGSRKSPRSRVAVFSRVVHRQNRSFSPISHTKPAVVARVSSGGDTSADYTAQQSSPPDIEDVTSSSPGIGEGYVALFARMLGLDHEPPDREQAIITLWKYSLGGKKCSDAIMQFPSCINLTVNLLRSDSSSACEAAAGLLRSLSSVNLYRNSVADSGAIEEINGLLRRPSLAPEVKEQSMSALWNLSVDEKIRVKLANEDIILLIIKYLDDEDIKVKEAAGGVLANLALSHVNHKMMVELGVIPKLARFLSSDAEGSTITRKEARNALLELVKDEYYRILVIEEGLVPVPLVGSAAFKSLSPGLHAWPTLPDGTELERTSKEPSRFGASELLLGLNIDEKNANIEESKINAIIGRTQQKFLARIGAIEVEGQKIPDSECSNNQGITLLPWMDGVARLVLILELENKSAISRAAESIADASINEDMRIAFKEAGAIKHLVRLLNHNDDAVRLAVTRALERLSISHVICQSIEAEGVLGPLVDIVNHSQISENVVEKSLHILARILDPSKEMILKFYDGSVNGSKKTLNGAKDNAVPVGLIGTKQAISKGINSSGRNDVLDSTFIARIVEILKFSSSSLQAKAASVLEFVILTDPTMVSLISVNIESGLDAVFQQKILRSSDEESDLDYLPPEKYAIAVEEAGLAISATSRLMTKLLDSEQFRQTINLPHFTGLLRQILKSNIPLHSKDWIAACLIKLTSFSGYNLDFDPINVEVTLYETIPRLIEQIKFSFSPETQEAAVVELNRIIYEGVVDSTRAIASKGAIYPLVKLIEEGSGRAVEASLAILYNLSMDSENHSAILAAGAVPALRRIVLSQRPQWERALHLLRSLPT 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00604 860 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 22 860 - -
Bva11g00604 860 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 791 833 IPR000225 GO:0005515
Bva11g00604 860 Pfam Armadillo/beta-catenin-like repeat 453 491 IPR000225 GO:0005515
Bva11g00604 860 SUPERFAMILY ARM repeat 421 843 IPR016024 -
Bva11g00604 860 SUPERFAMILY ARM repeat 110 322 IPR016024 -
Bva11g00604 860 Gene3D - 415 652 IPR011989 -
Bva11g00604 860 MobiDBLite consensus disorder prediction 73 92 - -
Bva11g00604 860 Gene3D - 98 327 IPR011989 -
Bva11g00604 860 Gene3D - 668 859 IPR011989 -
Bva11g00604 860 MobiDBLite consensus disorder prediction 70 94 - -
Bva11g00604 860 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 187 220 IPR000225 GO:0005515
Bva11g00604 860 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 463 491 IPR000225 GO:0005515
Bva11g00604 860 SMART arm_5 493 535 IPR000225 GO:0005515
Bva11g00604 860 SMART arm_5 821 857 IPR000225 GO:0005515
Bva11g00604 860 SMART arm_5 176 218 IPR000225 GO:0005515
Bva11g00604 860 SMART arm_5 452 492 IPR000225 GO:0005515
Bva11g00604 860 SMART arm_5 260 303 IPR000225 GO:0005515
Bva11g00604 860 SMART arm_5 780 820 IPR000225 GO:0005515
Bva11g00604 860 SMART arm_5 580 620 IPR000225 GO:0005515
Bva11g00604 860 SMART arm_5 219 259 IPR000225 GO:0005515
Bva11g00604 860 SMART arm_5 137 175 IPR000225 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00604 165 319 U-box Gene Family AT3G46510 30.128 4.57e-08 55.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00604 11 9460024 9465273 Bva11g00604 11 9460024 9465273 ECH