Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00600 ATGAACAAATCCTTAAACTTTCTTCACAACATCATCAAACCTTTCAAATTCGGTTCTAGAAGAGAAGGAAACAACGAAGAAGAATTTGGTAGAATAGCTTCCCAGGAGCAGAAGGTGTTTTCCTACGAAACCTTAGCTTCTGCTACTAAAAACTTTCACCCTCATCAGAAGCTTGGTGAAGGAGGATTCGGACCCGTCTACAAGGGAAAATTGGATGATGGGAGAGAAATTGCagtgaaaaaattatcacaactTTCAAAGCAAGGGAACAAAGAGTTCTTGAATGAGGCCAAGTTATTAGCTAGAGTGCAGCATCGGAATGTGGTGAATTTATTAGGTTATTGTGTTCATGGCAATGAGAAGCTACTTGTTTATGAGTATGTCCGCAATGAGAGCCTTGACAAGCTTCTATTCAAGTCGAACAGGAAAAAAGAGCTGTTGGATTGGAAAAGAAGGTTCGACATCATTGGAGGGATTGCAAAAGATCAAACACATGCCAACACACGTGTGGCTGGGACAAATGGATATATGGCTCCAGAATATATCATGCGTGGACATTTATCTGTGAAAGCAGATGTGTTTAGCTTTGGAGTAGTAATGTTAGAGTTGATTAGTGGTCAAAGAAACTCATCGTTTAGTTTGCAGGTGGATGCACAGAATCTGATTGATTGGgCCTACAAGCTTTACAAGAAAGGAAGGAGCATGGAAATGGTGGATCCTTCATTAGCATCGTCTGCAGTAGCAGATCAAGTGGCAATGTGTATACAACTAGGGTTGCTTTGCACACAAGGTGACCCTAATCTCCGCCCTACCATGCGGCGCGTGGTGGTGATTTTGTCGAAGAAGCCGGGGCACATGGAGGAACCAACCCGGCCGGCGATGCCCGGTTCTAGATACAGAAGGTTTCCTGGAACTTCTGCAATTTCTTCCACTCCTGGTACTTCTGGGGAATCTGATTCAAATTCACAGACTTTTGACTCCAGCAATAACTATTCCACCACTgcaacaagaacaagaacaagaacaagaacagGGACAACCTCCGCTAATCCAGAACTAGGTGACCCACGAGGGAAACGTCCAATGTA 1088 0.4182 MNKSLNFLHNIIKPFKFGSRREGNNEEEFGRIASQEQKVFSYETLASATKNFHPHQKLGEGGFGPVYKGKLDDGREIAVKKLSQLSKQGNKEFLNEAKLLARVQHRNVVNLLGYCVHGNEKLLVYEYVRNESLDKLLFKSNRKKELLDWKRRFDIIGGIAKDQTHANTRVAGTNGYMAPEYIMRGHLSVKADVFSFGVVMLELISGQRNSSFSLQVDAQNLIDWAYKLYKKGRSMEMVDPSLASSAVADQVAMCIQLGLLCTQGDPNLRPTMRRVVVILSKKPGHMEEPTRPAMPGSRYRRFPGTSAISSTPGTSGESDSNSQTFDSSNNYSTTATRTRTRTRTGTTSANPELGDPRGKRPM 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00600 362 PANTHER RECEPTOR-LIKE KINASE 3 161 - -
Bva11g00600 362 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 3 161 - -
Bva11g00600 362 ProSiteProfiles Protein kinase domain profile. 52 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g00600 362 Pfam Protein tyrosine and serine/threonine kinase 55 160 IPR001245 GO:0004672|GO:0006468
Bva11g00600 362 Pfam Protein tyrosine and serine/threonine kinase 162 277 IPR001245 GO:0004672|GO:0006468
Bva11g00600 362 Gene3D Transferase(Phosphotransferase) domain 1 158 290 - -
Bva11g00600 362 MobiDBLite consensus disorder prediction 283 362 - -
Bva11g00600 362 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 161 335 - -
Bva11g00600 362 SUPERFAMILY Protein kinase-like (PK-like) 36 295 IPR011009 -
Bva11g00600 362 MobiDBLite consensus disorder prediction 303 351 - -
Bva11g00600 362 Gene3D Phosphorylase Kinase; domain 1 16 127 - -
Bva11g00600 362 PANTHER RECEPTOR-LIKE KINASE 161 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00600 Bva-Chr11 9429664 9433498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00600 32 294 Receptor kinase-like Gene Family AT4G11530 40.777 2.73e-77 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva11g00600 PK_Tyr_Ser-Thr 9.8e-10 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00600 11 9429664 9433498 Bva11g00600 11 9429664 9433498 ECH