Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00597 ATGGTGCTCTTCAAAGTTTCACGCAAAGAGACGACACCGTTTGGTGATCAGAAGCCTGGAACTTCTGGTCTCCGCAAGAAGGTTAAAGTATTCGTGCAGCCTAATTACCTGCACAATTTCGTTCAGGCTACTTTCAATGCACTAACAGCAGAAAAAGTTAGAGGTGCTACACTAGTTGTATCTGGCGATGGTCGTTATTTTTCAAAGGATGCTATTCAGATCATTATCAAAATGTCTGCTGCAAATGGAGTAAGACGTATTTGGGTTGGTCAAAATGGATTGCTTTCAACACCGGCTGTATCTGCTGTTATACGTGAAAGAGTTGGGATTGACGAATCCAAGGCAACAGGTGCATTTATACTTACAGCAAGTCACAATCCTGGTGGTCCTCATGAGGATTTTGGGATTAAATATAACATGGAAAATGGTGGGCCAGCTCCAGAGGGTATTACTGACAAGATCTATGAGAACACAAAAACAATTAAGGAATACCTGATTGCTGAAGATCTGCCTGATGTGGATATCAGTTCAATAGGTGTTACAAGCTTTACAGGCCCTGAAGGACAATTTGATGTTGAGGTTTTTGATTCAGCAAGTGATTACGTAAAATTGATGAAGtcaatttttgattttgattctatCAAGAAATTATTGTCGTCACCCAAATTCACATTCTGTTATGATGCTCTTCATGGAGTTGCTGGAGCTTATGCCAAGCGTATTTTTGTTGAAGAACTAGGAGCGCAAGAAAGTTCTCTACTTAACTGTGTACCAAAGGAAGACTTTGGAGGAGGGCATCCAGATCCCAATTTGACATATGCAAAGGAGCTGGTTGCTCGCATGGGACTGGGAAAATCTGAGTCGCAAGTAGAGCCCCCAGAATTTGGTGCTGCTGCTGATGGTGATGCAGACCGTAACATGATTCTTGGTAAAAGgttttttgTTACTCCGTCTGATTCCGTGGCCATTATTGCTGCAAATGCTGTTGAAGCTATACCATACTTCTCTGCTGGCTTAAAGGGTGTTGCCAGGAGCATGCCAACCTCTGCTGCCCTGGATGTTGTAgccaaacattttaatttgaaattttttgagGTCCCAACAGGTTGGAAGTTCTTTGGTAATTTAATGGATGCTGGATTATGTTCAATTTGCGGGGAAGAAAGTTTTGGAACTGGTTCCGACCATATCCGTGAGAAGGATGGAATCTGGGCAGTTTTGGCCTGGCTTTCTATACTtgcacataaaaataaagataaacttGGTGGGGACAAGCTTGTAACGGTTGAAGACATAGTTACCCAACATTGGGCAACCTATGGGCGCCATTATTATACTCGATATGACTATGAAAACGTGGATGCAGGTGCAGCAAAGGAACTGGTGGCGTATTTGGTTAAATTGCAGTCTTCCCTTTCTGAAGTCAATAaGATTATCAAGGGAGTAAGATCGGATGTGTCAAATGTTGTCCATGCTGATGAATTTGAATACAAAGATCCTGTGGACGGTTCTGTTTCAAGCCATCAAGGCATCCGATATTTATTTGAGGATGGATCACGATTGATTTTCCGCCTCTCGGGAACCGGGTCCGAAGGAGCAACTATTCGTCTATACATTGAGCAATATGAAAAGGATCCATCAAAAACTGGGAGATCTTCTCAAGATGCCCTTGCACCTCTCGTTGAGGTTGCTCTAAAGCTATCAAAGATGAAGGAATTCACTGGTCGATCTGCTCCAACAGTTATTACATG 1751 0.4118 MVLFKVSRKETTPFGDQKPGTSGLRKKVKVFVQPNYLHNFVQATFNALTAEKVRGATLVVSGDGRYFSKDAIQIIIKMSAANGVRRIWVGQNGLLSTPAVSAVIRERVGIDESKATGAFILTASHNPGGPHEDFGIKYNMENGGPAPEGITDKIYENTKTIKEYLIAEDLPDVDISSIGVTSFTGPEGQFDVEVFDSASDYVKLMKSIFDFDSIKKLLSSPKFTFCYDALHGVAGAYAKRIFVEELGAQESSLLNCVPKEDFGGGHPDPNLTYAKELVARMGLGKSESQVEPPEFGAAADGDADRNMILGKRFFVTPSDSVAIIAANAVEAIPYFSAGLKGVARSMPTSAALDVVAKHFNLKFFEVPTGWKFFGNLMDAGLCSICGEESFGTGSDHIREKDGIWAVLAWLSILAHKNKDKLGGDKLVTVEDIVTQHWATYGRHYYTRYDYENVDAGAAKELVAYLVKLQSSLSEVNKIIKGVRSDVSNVVHADEFEYKDPVDGSVSSHQGIRYLFEDGSRLIFRLSGTGSEGATIRLYIEQYEKDPSKTGRSSQDALAPLVEVALKLSKMKEFTGRSAPTVIT 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00597 583 PANTHER BNAA09G30060D PROTEIN 3 114 - -
Bva11g00597 583 SUPERFAMILY Phosphoglucomutase, first 3 domains 199 314 IPR016055 GO:0005975|GO:0016868
Bva11g00597 583 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 17 164 IPR005844 GO:0005975|GO:0016868
Bva11g00597 583 CDD PGM1 11 583 - -
Bva11g00597 583 PANTHER BNAA09G30060D PROTEIN 114 583 - -
Bva11g00597 583 Gene3D - 314 412 - -
Bva11g00597 583 SUPERFAMILY Phosphoglucomutase, first 3 domains 4 229 IPR016055 GO:0005975|GO:0016868
Bva11g00597 583 PRINTS Phosphoglucomutase/phosphomannomutase family signature 222 241 IPR005841 GO:0005975|GO:0016868
Bva11g00597 583 PRINTS Phosphoglucomutase/phosphomannomutase family signature 117 131 IPR005841 GO:0005975|GO:0016868
Bva11g00597 583 PRINTS Phosphoglucomutase/phosphomannomutase family signature 258 271 IPR005841 GO:0005975|GO:0016868
Bva11g00597 583 PRINTS Phosphoglucomutase/phosphomannomutase family signature 293 308 IPR005841 GO:0005975|GO:0016868
Bva11g00597 583 Gene3D - 205 313 - -
Bva11g00597 583 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 317 440 IPR005846 GO:0005975|GO:0016868
Bva11g00597 583 Gene3D - 423 583 - -
Bva11g00597 583 SUPERFAMILY Phosphoglucomutase, first 3 domains 301 447 IPR016055 GO:0005975|GO:0016868
Bva11g00597 583 Gene3D - 6 204 - -
Bva11g00597 583 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 200 309 IPR005845 GO:0005975
Bva11g00597 583 SUPERFAMILY Phosphoglucomutase, C-terminal domain 442 583 IPR036900 GO:0016868|GO:0071704
Bva11g00597 583 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 3 114 IPR045244 GO:0004614|GO:0005975
Bva11g00597 583 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 114 583 IPR045244 GO:0004614|GO:0005975
Bva11g00597 583 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 118 127 IPR016066 GO:0000287
Bva11g00597 583 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 500 544 IPR005843 GO:0016868|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00597 Bva-Chr11 9401045 9408877 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00597 11 9401045 9408877 Bva11g00597 11 9401045 9408877 ECH