Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00455 ATGGTTTTCCCTAAACCAGCTTCTGAATCTGATCTCGTTTTCCACTCAAATTTTGCTTCTCCCTATGGTGGAGATTCTCTTCCAAGCTTTGATATGCCTGAAAACTCGATGTCGAAAGAGTCAGCATACCAGAACATACATGATGAATTGCAGCTTGATGGGATTCCAAAGCTGAACTTGGCTTCCTTTGTGACCACAGCCATGGAGGAAGAGTGCAACAAGCTCATTATGGAATCCATCAACAAGAACTACGTTGATATGGATGAGTACCCTGTTACCACTGAGCTTCACAACCGGTGCGTGAACATGATAGGGCGTATGTTCCATGCTCCAATTGGAGAAAATGAGGATGCAATTGGAGTGGGAACTGTTGGGTCATCAGAGGCTATAATGTTAGCAGGTCTTGCATTCAAGAAGAGGTGGCAGAACAAAAGGAAAGCTCAAGGCAAGCCTTTTGACAAGCCTAACATTGTCACTGGTGCCAATGTACAGGTTTGTTGGGAGAAATTTGCAAGGTATTTTGAGGTGGAGTTAAAGGAAGTGAAGGTGAGGGAAGGATACTATGTGATGGACCCTGCCAAAGCTGTTGACATGGTGGATGAGAACACTATTTGCGTGGCTGCAATTCTTGGCTCAACTTACAATGGAGAATTTGAAGATGTCAAGCTCTTAAATGACCTTCTGCTAGAAAAGAACAAGCAAACTGGATGGGATACACCTATTCATGTTGATGCAGCCAGTGGTGGCTTCGTTGCCCCTTTCCTTTACCCAGAGCTTGAATGGGATTTCAGGCTTCCATTGGTGAAGAGCATCAATGTTAGTGGCCACAAGTATGGTTTAGTTTATGCTGGAATTGGTTGGGTTCTATGGAGGACCAAAGAGGACTTGCCAGAGGAACTTGTTTTCCATATTAATTACCTTGGTGCTGACCAACCCACCTTCACTCTCAATTTTTCCAAAGGTTCTAGCCAGATCATTGCTCAATATTATCAGTTAATTCGCCTTGGCAAAGAGGGCTACCGAAGTGTGATGGAGAAATGTAGGGACAATGCTATGGTGCTAAAGGAAGGACTGGAGAAAATTGGATGCTTTAACATACTTTCAAAGGACAATGGTGTTCCCTTGGTGGCCTTTTCTCTCAAAGACACAAGTCTATGCAATGAATATGAATTATCGGAGAAGCTGCGCCGCTATGGCTGGATTGTCCCGGCATATCCGATGCCGCCGGCAGCTCAGCACATCACTGTACTCCGAGTTGTGATTAGGGCAGAGTTTTCACGCACACTTGTCGAACACCTCGTCCATGACATAATAAATGTGCTGCATGAACTTGAAAAGCATGCTGCCAAAGTGAGTTATGACATTCAGGAAGAGAAGGCCGTGGATGACAGTGCTGGGATCAAGAGGACTGCTTTAGATGCCAAGAAGGAAATAATTGGCCAAGAAGCCAACAAGAGGCAGAAAATCTTGGCAGCCTA 1478 0.4479 MVFPKPASESDLVFHSNFASPYGGDSLPSFDMPENSMSKESAYQNIHDELQLDGIPKLNLASFVTTAMEEECNKLIMESINKNYVDMDEYPVTTELHNRCVNMIGRMFHAPIGENEDAIGVGTVGSSEAIMLAGLAFKKRWQNKRKAQGKPFDKPNIVTGANVQVCWEKFARYFEVELKEVKVREGYYVMDPAKAVDMVDENTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGWDTPIHVDAASGGFVAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVLWRTKEDLPEELVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGKEGYRSVMEKCRDNAMVLKEGLEKIGCFNILSKDNGVPLVAFSLKDTSLCNEYELSEKLRRYGWIVPAYPMPPAAQHITVLRVVIRAEFSRTLVEHLVHDIINVLHELEKHAAKVSYDIQEEKAVDDSAGIKRTALDAKKEIIGQEANKRQKILAA 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00455 492 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 17 444 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bva11g00455 492 Gene3D - 1 65 - -
Bva11g00455 492 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bva11g00455 492 Gene3D - 361 448 - -
Bva11g00455 492 PANTHER GLUTAMATE DECARBOXYLASE 1 491 - -
Bva11g00455 492 CDD DOPA_deC_like 59 437 - -
Bva11g00455 492 PANTHER GLUTAMATE DECARBOXYLASE 1 491 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bva11g00455 492 Gene3D - 66 360 IPR015421 GO:0003824
Bva11g00455 492 SUPERFAMILY PLP-dependent transferases 18 447 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00455 Bva-Chr11 8244126 8247267 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00455 1 479 Calmodulin-binding Proteins AT5G17330 76.082 0.0 765
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00455 11 8244126 8247267 Bva11g00455 11 8244126 8247267 ECH