Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00454 ATGGTTTTCCCTAAACCAGCTTCTGAATCTGATCTCGTTTTCCACTCAAATTTTGCTTCTCCCTATGGTGGAGATTCTCTTCCAAGGTTTGACATGCCAGAGAACTCGCTGCCGAAGGAGTCAGCATACCAGAACATACATGATGAATTGCAGCTTGATGGGATTCCAAAGCTGAACTTGGCTTCCTTTGTGACCACAGCCATGGAGGAAGAGTGCAACAAGCTCATTATGGAATCCATCAACAAGAACTACGTTGATATGGATGAGTACCCTGTTACCACTGAGTTTCACAACCGGTGCGTGAACATGATAGGGCGTCTGTTCAATGCTCCAATTGGAGAAAATGAGGATGCAATTGGAGTGGGAACTGTTGGGTCATCAGAGGCTATAATGTTAGCAGGTCTTGCATTCAAGAAGAGGTGGCAGAACAAAAGGAAAGCTCATGGCAAGCCTTTTAACAAGCCTAACATTGTTACTGGTGCAAATGTACAGGTTTGTTGGGAGAAATTTGCAAGGTATTTTGAGGTGGAGTTGAAGGAAGTGAAGGTGAGGGAAGGATACTATGTGATGGACCCTGCCAAAGCTGTTGACATGGTGGATGAGAACACTATTTGTGTGGCTGCAATTCTTGGCTCAACTTACAATGGAGAATTTGAAGATGTCAAGCTCTTAAATGACCTTCTGCTAGAAAAGAACAAGCAAACTGGATGGGATACACCTATTCATGTTGATGCAGCCAGTGGTGGCTTCATTGCCCCTTTCCTTTACCCAGAGCTTGAATGGGATTTCAGGCTTCCATTGGTGAAGAGCATCAATGTTAGTGGCCACAAGTATGGTTTAGTTTATGCTGGAATTGGTTGGGTTCTATGGAGGACCAAAGAGGACTTGCCTGAGGAACTTGTTTTCCATATTAATTACCTTGGTGCTGACCAACCCACCTTCACTCTCAATTTTTCCAAAGCCTCTAGCCAGATCATTGCTCAATATTATCAGTTAATTCGCCTTGGAAAGGAGGGCTACCGAAGTGTGATGGAGAAGTGTAGGGAAAATGCTATGGTGTTAAAGGAAGGACTGGAGAAAATTGGATGCTTTAACATACTTTCAAAGGACAATGGTGTTCCTGTAGTGGTCTTTTCTCTCAAGGACACGAGTCGATACAGTGAGTATGAATTATCGGAGAAGCTGTGCCGCTATGGCTGGATTGTCCCGGCGTATCCGATGCCGCCGGCAGCTCAGCATATCAATGTGCTCCGAGTTGTGATTAGGGCAGAGTTTTCACGCACACTTGCCGAACACCTGATTCATCATACATCTTATCCTTGTTTGCAAGCCATcta 1337 0.4458 MVFPKPASESDLVFHSNFASPYGGDSLPRFDMPENSLPKESAYQNIHDELQLDGIPKLNLASFVTTAMEEECNKLIMESINKNYVDMDEYPVTTEFHNRCVNMIGRLFNAPIGENEDAIGVGTVGSSEAIMLAGLAFKKRWQNKRKAHGKPFNKPNIVTGANVQVCWEKFARYFEVELKEVKVREGYYVMDPAKAVDMVDENTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVLWRTKEDLPEELVFHINYLGADQPTFTLNFSKASSQIIAQYYQLIRLGKEGYRSVMEKCRENAMVLKEGLEKIGCFNILSKDNGVPVVVFSLKDTSRYSEYELSEKLCRYGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAEHLIHHTSYPCLQAI 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00454 445 SUPERFAMILY PLP-dependent transferases 18 435 IPR015424 -
Bva11g00454 445 Gene3D - 66 360 IPR015421 GO:0003824
Bva11g00454 445 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 381 IPR002129 GO:0016830|GO:0019752|GO:0030170
Bva11g00454 445 CDD DOPA_deC_like 59 434 - -
Bva11g00454 445 PANTHER GLUTAMATE DECARBOXYLASE 1 436 - -
Bva11g00454 445 Gene3D - 361 442 - -
Bva11g00454 445 Gene3D - 1 65 - -
Bva11g00454 445 PANTHER GLUTAMATE DECARBOXYLASE 1 436 IPR010107 GO:0004351|GO:0006536|GO:0030170
Bva11g00454 445 TIGRFAM Glu-decarb-GAD: glutamate decarboxylase 17 436 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00454 Bva-Chr11 8234688 8237944 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00454 1 434 Calmodulin-binding Proteins AT5G17330 81.567 0.0 743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00454 11 8234688 8237944 Bva11g00454 11 8234688 8237944 ECH