Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00150 atGCAAATTGTGAAGGATAGGTGGAAAGTGAAGAGTGGGAATTACGATCAGCTTTTGTCTGATTATGATAGTGCTGTGGATCCAGATGTACCCAGTAGAGAGAATAGCCCAGCAATTCTGCCCATTTCGTCAAGGTCGGATTCTTTCTCTCCCCCTAGAATTGGCTATATTGAACACCGTGTTTCAAAATTGGATACTCTTGCTGGCATTGCAATCAAATACGGAGTTGAGGTTGCAGATATCAGAAAGATGAATAACCTTGTTACAGACCATCAGATGTTTGCTCTTGAGTATCTCCAGATTCCTCTACCTGGAAGACACCCTCCATCTCCCTGCTTATCAAATGATTCCAATGCTACaaaACCTAGTAGCTCTGACAACAGTCCAACTGGCCATCTGCACCATGAGTTGTTTGACTCATTCCAGTCCTCGAGAATAAAGCCAAACCAGGGTAGGGTCTCAATGGGCACGAGCCCTTTGCAAGGTTATTATGTACCTAAACCAGCAGATGGGAGACTGCCCGAAGGCTTTGAGATGGCATTATATAGCAAGGATGATTCTGATTCTTCCGAAAGTGGTTCATTACCCAAGAACTCGCCTATGTCTGACCGCATTCATCATCGAAAATCTAGAAGTTTGATTAATGAACTTTTGGATGAGATTCTGGAAAAATATGAAGTTGAACCTGTTCATGAAGCTGTAGAAGTTAACTCTATTAGATGGAATGATAAGCTTTTGAGAAGGCGTCAGAAATCTGAAGCAGACTTTACTCGCACGCATGGCTTACTTATGAAAGAGGAAAATGGCAACGGTAGTGGGTTTTCAGCGAGAACAGTAAAGGGCTTAGCTCAGAGACCAAAAGCAACAAGCCGAACTTCATTGATGTCTGATTCTAATGGAAATGGCTTGAATCCTGTGCTAATAGGTTTGGGAGTAGCTTTTCTGACTGATGGGCCATCTGGTGTGAGAAAATCATCAAGCATGTCATGTTTACAAGAGAAGGAAAACAACAGCTCCTCTTCCCTTTGGCCAACCTCAAAATGGAATTTGAAGCCAGATTTACAGGCATTTTCAAGTGCAGTAACTGGTCGAAAAAACAAAGCTGCACTTGATTA 1115 0.4242 MQIVKDRWKVKSGNYDQLLSDYDSAVDPDVPSRENSPAILPISSRSDSFSPPRIGYIEHRVSKLDTLAGIAIKYGVEVADIRKMNNLVTDHQMFALEYLQIPLPGRHPPSPCLSNDSNATKPSSSDNSPTGHLHHELFDSFQSSRIKPNQGRVSMGTSPLQGYYVPKPADGRLPEGFEMALYSKDDSDSSESGSLPKNSPMSDRIHHRKSRSLINELLDEILEKYEVEPVHEAVEVNSIRWNDKLLRRRQKSEADFTRTHGLLMKEENGNGSGFSARTVKGLAQRPKATSRTSLMSDSNGNGLNPVLIGLGVAFLTDGPSGVRKSSSMSCLQEKENNSSSSLWPTSKWNLKPDLQAFSSAVTGRKNKAALD 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00150 371 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN 45 371 - -
Bva11g00150 371 MobiDBLite consensus disorder prediction 107 169 - -
Bva11g00150 371 MobiDBLite consensus disorder prediction 111 131 - -
Bva11g00150 371 CDD LysM 57 101 IPR018392 -
Bva11g00150 371 Gene3D LysM domain 43 108 IPR036779 -
Bva11g00150 371 MobiDBLite consensus disorder prediction 142 157 - -
Bva11g00150 371 MobiDBLite consensus disorder prediction 183 207 - -
Bva11g00150 371 MobiDBLite consensus disorder prediction 324 346 - -
Bva11g00150 371 SMART LysM_2 58 102 IPR018392 -
Bva11g00150 371 ProSiteProfiles LysM domain profile. 57 101 IPR018392 -
Bva11g00150 371 Pfam LysM domain 59 91 IPR018392 -
Bva11g00150 371 PANTHER LOC443603 PROTEIN-RELATED 45 371 IPR045030 -
Bva11g00150 371 SUPERFAMILY LysM domain 56 102 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00150 Bva-Chr11 3767945 3772718 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00150 11 3767945 3772718 Bva11g00150 11 3767945 3772718 ECH