Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00137 ATGCCTCCTTCGCGTAGACGCGGAGCGCACAAGgccaaggcaaatgggcagtTGAGATTGGGCGATCTTGTGCTAGCTAAGGTCAAGGGATACCCAGCGTGGCCTGCCAAGATAAGCAGGCCTGAAGATCATGATAAAGTCCCTGAtccaaagaaatattttgttcaattcttTGCTACTAAAGAAATTGCTTTTGTTGCCCCAGCGGATATTCAGGCATTTACAAGTGAGGTTAAGAATAAATTGTCAACTAGGTGTCAAGGCAAGACAACAGTCTTCGCCCAAGCTGTAAAGGAAATTTGTGCAGCATTTGATGAATTACAAAAGCAGAATGCTAGTGGTTTGAGAGATGACACTGATGATTCACGTGTTGGTTCAGAGGCTCTTTCTCATGATGGGGTAGTGGCTGATTTAAAGGATGCCACTGGTGATGTGgcaagtgaagaaaaaaatggcaaTTTTGTAAGTAATGTAGGCTCTAGATTGGAACGCTGCTCGCAGAGATGTGGAGAAAGTAACAGTCAAGATGAAAAGCCCACTGTATCTGGTAATTCAAATGATAGTTCATCTCCTGTGATTAAAAGTAAACCATCCAATATTGCAAATGTAAAGAAGGAGGCGGGCACATCTAATCTTAAGGACCCATTGTTTTTGAAGGAGAAAGTTTCTGACTGGAAGGTTGCAGGTGGTATTAATGATTCTAAGGAAGATGATAATGGGCAGAGGGCGTTTACAAGTGGGAACAAGTCAAAAAAGCTCAGCACTAACTCAAGGAAGAGAAGTGAGGGTGCAGGTGATAGAAATAAAAGTGGTGACTATGCGGGTACATTGTTGAAGGAGAAAACTTCTAGAGGTTGTGCTGATCTTTCCAAGTCAAGGGAATCTGTgaaaagtggaaagaaagaaaagaatgcttTAGGTGTTGAATCTGATTCTCTAGATTCTCTCAAATTGGATACTGATGTTAATagtggaaagaaagacaaaaacttgataaaatttagaagTAAGGTAAAGAATGAGTTCCAGGTGCATGCTACCAAGAAGTTGAAGTGTATGGACTCAAATGATGATACAACTTTTGGATCTTCACAGAAAGATACTAAGAGTGCTTCGCCTGGTTCTACCGTTGTTGAtgacaaatcaattaaaaaatcagaGTTGAAAAGGTCCTCATTATGtgtaaaagttgaaaaaagcTTGACACCTAGAGGTCGAACTGGTGTTCTAGGTTCTGATGATTCTGTAGATGGAGCTGTGTTACCTGTGCCAAAACATCATAGCCAAATCCAGCAGTCTATCCCTGATTCTGCTAGCCTTGCATCTggtgaaaaaattgaaaggggTTCTCCTAGGCCTAAAACTGATGCAGATAATGTTTTTGTGAAACCATTACAAAGGAAACGTAGAGCTGTTTGCATATTtagtgatgatgatgaagaggaaCCCAAGACTCCAGTTCATGGAGGAACttcaaaaaatatcaaatcacCTTTGTATGTTTCAGAGGCTGCGAAGGGCAATAATGTACATTCAGAGAATTCTGATATTGCTCAGTTGGCTAACAGAAGTTCTACTGGACTTGGGGATAGCCATTTGAATGAACCATCTTCTGGATTGCATAATGACTGTTTGTCCACTGGCCAGATTCAAGAAGAGGATAAGAGGACTGAAGAAGTAATCCCTGTCCACGTATCCTGTAGTCCTGACAAATCAGACTTAAGGCAGGTTCTGTCAAAGGTGGCAAAATTAACCTCCATGTCTCCAGTAAAATCACCTCAGTCCATTCCAACGAACAAGTCAATAGGAGAGGGAAGTAAGTCTTCCAAACCCACGATTAAAGTGTCCTCTCGCACTACTCAAAAGAAGGGTGATATTGGATCTTCAAAGGGTATTAGCACTTCTCAAAATCAAGTAGCAGCCCATAAAAAGAAGCCTGCATCTTCTGTGGAAACATCTAAAAGTACCCCAAAGTCAATCTCCTCGGCAGTTGAGATTCCTTCCACAGCAGAAAATTTGAAGGAGTCTATTGCTTTTCATGTTGATAGATTAGAAGTGAGTGTGGAGGAAAAGAGTAGCTTGTATACTGGTGTTCAGACTCCAGATTCTGCTATAACTATGAAACATCTTATTGCAGCTGCCCAGGCCAAAAGGAGACAAGCTCATTCTCAATGTCTTCCTCTTGGAATCAACAGTTTTCAGGGGAAAAGTCCTAGCCCCTCTACAGTTCAGCCGCTTTTGCCTCTCTCAAGCAATTTTTCACCGGCGGATGTACAGGGAGCATATGAGCACCCAACATTGCGTTCTCCATCAACTAATGGACATCATTCCGGATCACGAAATCAATTTAATGCTGAAGAAATTGAGGAGGTAAGGGTTGGTTCTGTGCAAATGGCTCTAGGGGGTTCCCTGAGTGGTGATACCGAGGCTGCTGTTGCTCGTGATGCTTTTGAAGGGATGATAGAGACTTTGTCAAGGACCAAGGAAAGTATTGGACGTGCCACTCGTCTTGCAATTGATTGTGCAAAATATGGTATTGCCAATGAGGTTGTTGAACTTCTCATCCGAAAGCTAGAAAGTGAATCTAGTTTTCATCGCAGAGTGGATTTGTTCTTTCTTGTCGATTCCATCACTCAGTGCTCACATAATCAAAAGGGCATTGCAGGAGCCTCTTACATCCCCATAGTTCAAGCAGCATTGTCACGTCTTGTTGGTGCTGCTGCTCCCCCAGGATCTGGTGCCCGTGAAAATCGTCGTCAGTGTCTCAAGGTTTTGAGGCTGTGGCTTGAGAGGAAAATTTTTCCTGAATCTGTTCTTCGCCGGCACATGGATGACATTGGAGTTTCTAACAATGATATGACCATTAACTTATCTCTCAGGCGCCCATCTCGGTCAGAGCGGGCTGTGGATGATCCAATTAGGGAAATGGAAGGCATGCTTGTTGATGAGTATGGAAGTAATGCTACATTTCAACTGCCTGGctttttatcttcaaatatgtttgatgaagaagatgacgACGACATTCCTATCAGTTTGGGGAAGGACTCATCTGATGCCTCACCGGCAGACCCTACTCGTACTCTTGGAGAATCAGAAACTTCAACAGTTACCCCAAATGACAAAAGGCATTTTATCTTGGAAGATGTGGATGGTGAGCTTGAAATGGAAGATGTTTCAGGTCATTTGAAGGATGAAAGACCTGTGTTATTGAATAGTTCTTCTGAAATGGATTTGCAACTTCAGGGCTCAGATAGGAATTTAGATCCAGCTTCAATAATTTCTGTGCAGATGCATCCTATGCCTGATGGCTCTCCTCCATTGCCGCTTGATTCTCCTCCTTCACCCCCACCTTTACCTTCTtcacctccaccaccacctcctCCATTATCTCCTTCTCCTCCACCAGCACCCCCCCCAATGTCACAGCTCCCTCCTCCTCCTTTACCTGCTGGCCCTCCACCCCCTCCATTACCCTCTGGCCCTCCACCCCCTCCATTACCCTCTGGTCCTCCACCACCTCCCTTACCCTCTGGCCCTCCACCATCATTGGTTCCTCAATCATCTGGACCAGCCCGGCCTTCATTGCTCCCTCAGCCGTTAATGCCAGCTCAATCATCACTTCAGTCCTCACCACAGTTGGGGTTTCAGCAGATCGTACCTCATGATTATGGCAGCACAACTAGTGGTAACCAAATAGTTCAAATGGCTGGAGGTCACAATAATGTAGTTGTGAAGAATGAAATGTTTCCACAGCCATCTTCTTGCTTTGCACCAGTATCTGGCTGCAACTCTCAGGAAGCTTCTGCTTTTAATCATTCAAGACAACCAGAGTATGGACAGAATGATGTATATTTAAACGCTCAAGTTCCTCAGTCCAACCAGCAAACTCAGCCGGTTCAGCAACATCTTCCACATTCATTCCACCCCCCCTATTCTTTGCCGGCCCTTCAGGATGGTCGGAGGCAATATGTTGCTGATGAACAATTGAGGATGCCATCTAGTgaatttaaaacaaacaatCAACATGGTGCATGGAGAGGGAGAAATCCTTCTTGTCCTGGTCCCCCCCATGGGCAGGAAGGTTATTTTCGGCCACCACTTGAAAGGCCTCCCACAAGCAACACAGGTTTTCAGCGTGGTGCCCCGAATAATTTACCTGCTACACCTCCAATATCAGGACATGGTGTTCCTCAGATGTTTCCCTGTAGGCCAGACATTCCTGCACTTAATTGTTGGAGACCAACTTG 4250 0.4167 MPPSRRRGAHKAKANGQLRLGDLVLAKVKGYPAWPAKISRPEDHDKVPDPKKYFVQFFATKEIAFVAPADIQAFTSEVKNKLSTRCQGKTTVFAQAVKEICAAFDELQKQNASGLRDDTDDSRVGSEALSHDGVVADLKDATGDVASEEKNGNFVSNVGSRLERCSQRCGESNSQDEKPTVSGNSNDSSSPVIKSKPSNIANVKKEAGTSNLKDPLFLKEKVSDWKVAGGINDSKEDDNGQRAFTSGNKSKKLSTNSRKRSEGAGDRNKSGDYAGTLLKEKTSRGCADLSKSRESVKSGKKEKNALGVESDSLDSLKLDTDVNSGKKDKNLIKFRSKVKNEFQVHATKKLKCMDSNDDTTFGSSQKDTKSASPGSTVVDDKSIKKSELKRSSLCVKVEKSLTPRGRTGVLGSDDSVDGAVLPVPKHHSQIQQSIPDSASLASGEKIERGSPRPKTDADNVFVKPLQRKRRAVCIFSDDDEEEPKTPVHGGTSKNIKSPLYVSEAAKGNNVHSENSDIAQLANRSSTGLGDSHLNEPSSGLHNDCLSTGQIQEEDKRTEEVIPVHVSCSPDKSDLRQVLSKVAKLTSMSPVKSPQSIPTNKSIGEGSKSSKPTIKVSSRTTQKKGDIGSSKGISTSQNQVAAHKKKPASSVETSKSTPKSISSAVEIPSTAENLKESIAFHVDRLEVSVEEKSSLYTGVQTPDSAITMKHLIAAAQAKRRQAHSQCLPLGINSFQGKSPSPSTVQPLLPLSSNFSPADVQGAYEHPTLRSPSTNGHHSGSRNQFNAEEIEEVRVGSVQMALGGSLSGDTEAAVARDAFEGMIETLSRTKESIGRATRLAIDCAKYGIANEVVELLIRKLESESSFHRRVDLFFLVDSITQCSHNQKGIAGASYIPIVQAALSRLVGAAAPPGSGARENRRQCLKVLRLWLERKIFPESVLRRHMDDIGVSNNDMTINLSLRRPSRSERAVDDPIREMEGMLVDEYGSNATFQLPGFLSSNMFDEEDDDDIPISLGKDSSDASPADPTRTLGESETSTVTPNDKRHFILEDVDGELEMEDVSGHLKDERPVLLNSSSEMDLQLQGSDRNLDPASIISVQMHPMPDGSPPLPLDSPPSPPPLPSSPPPPPPPLSPSPPPAPPPMSQLPPPPLPAGPPPPPLPSGPPPPPLPSGPPPPPLPSGPPPSLVPQSSGPARPSLLPQPLMPAQSSLQSSPQLGFQQIVPHDYGSTTSGNQIVQMAGGHNNVVVKNEMFPQPSSCFAPVSGCNSQEASAFNHSRQPEYGQNDVYLNAQVPQSNQQTQPVQQHLPHSFHPPYSLPALQDGRRQYVADEQLRMPSSEFKTNNQHGAWRGRNPSCPGPPHGQEGYFRPPLERPPTSNTGFQRGAPNNLPATPPISGHGVPQMFPCRPDIPALNCWRPT 1416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00137 1416 CDD HDGF_related 16 103 IPR035496 -
Bva11g00137 1416 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 1146 - -
Bva11g00137 1416 MobiDBLite consensus disorder prediction 585 664 - -
Bva11g00137 1416 MobiDBLite consensus disorder prediction 754 781 - -
Bva11g00137 1416 ProSiteProfiles CID domain profile. 809 950 IPR006569 -
Bva11g00137 1416 MobiDBLite consensus disorder prediction 284 324 - -
Bva11g00137 1416 SMART PWWP_4 18 75 IPR000313 -
Bva11g00137 1416 Gene3D - 8 115 - -
Bva11g00137 1416 Gene3D - 808 953 IPR008942 -
Bva11g00137 1416 MobiDBLite consensus disorder prediction 585 643 - -
Bva11g00137 1416 MobiDBLite consensus disorder prediction 1335 1399 - -
Bva11g00137 1416 MobiDBLite consensus disorder prediction 524 545 - -
Bva11g00137 1416 ProSiteProfiles PWWP domain profile. 20 77 IPR000313 -
Bva11g00137 1416 MobiDBLite consensus disorder prediction 765 781 - -
Bva11g00137 1416 PANTHER PROTEIN HUA2-LIKE 1 1 1146 - -
Bva11g00137 1416 SMART 558neu5 816 947 IPR006569 -
Bva11g00137 1416 MobiDBLite consensus disorder prediction 1096 1212 - -
Bva11g00137 1416 MobiDBLite consensus disorder prediction 353 386 - -
Bva11g00137 1416 MobiDBLite consensus disorder prediction 1019 1041 - -
Bva11g00137 1416 SUPERFAMILY Tudor/PWWP/MBT 14 109 - -
Bva11g00137 1416 MobiDBLite consensus disorder prediction 1189 1212 - -
Bva11g00137 1416 MobiDBLite consensus disorder prediction 999 1043 - -
Bva11g00137 1416 Pfam PWWP domain 21 104 IPR000313 -
Bva11g00137 1416 MobiDBLite consensus disorder prediction 356 379 - -
Bva11g00137 1416 Pfam CID domain 816 940 IPR006569 -
Bva11g00137 1416 MobiDBLite consensus disorder prediction 425 458 - -
Bva11g00137 1416 MobiDBLite consensus disorder prediction 650 664 - -
Bva11g00137 1416 MobiDBLite consensus disorder prediction 1102 1188 - -
Bva11g00137 1416 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1147 1416 - -
Bva11g00137 1416 MobiDBLite consensus disorder prediction 230 324 - -
Bva11g00137 1416 MobiDBLite consensus disorder prediction 166 200 - -
Bva11g00137 1416 PANTHER PROTEIN HUA2-LIKE 1 1147 1416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00137 Bva-Chr11 3647302 3662560 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00137 11 3647302 3662560 Bva11g00137 11 3647302 3662560 ECH