Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00130 ATGGCTCTGAGACCATTTTCTTTGAATCTTGTTCTTCTGCTTCTTATCATTTTAGCCAGAGAAGCTATCTGTGTGTCGACAAAGACGGCGGCGATCAATAGGGTTCAGGTTCTGACACAACAAGAATCTGATAGAGTGGTTGGACTTCCTGGGCAGCCTCCGGTGAAGTTCAAGCAATATGCAGGTTATATCACAGTGAATGAAAATCATGGAAGAGCACTGTTCTATTGGTTCTTTGAGTCCCAAGACAAACCACAAGAAAAACCTCTCCTCCTGTGGCTCAATGGAGGCCCTGGATGTTCATCAATTGGCTATGGAGAAGCAGAGGAGCTAGGACCCTTCTTTCCCCAGAACAGCACTGAACCAAAGCTAAAGTTAAACCCCTATTCTTGGAACAAAGCTGCAAATCTGCTGTTTCTTGAATCCCCTGTTGGAGTGGGATTTTCATATACCAACAACAGCCGTGATATCGATCAACTTGGCGACACAATCACTGCTAAGGATTCACACACCTTTATTGTAAAATGGTTTCGGCGTTTTCCACAATTCAGGTCCCATGAGTTCTACATTGCTGGTGAAAGCTATGCAGGTCACTATGTTCCCCAACTTTCAGAGCTTATTTTCGACAAAAATCATAACCCTACCAAGAAAGACTATATTAACTTCAAAGGGCTCATgATTGGGAATGCACTATTAGATGATGAAACAGATCAAAAGGGGATGATAGATTACGCTTGGGATCATGCTGTGATTTCTGATGAGTTATATGAGAACATCAAAAACGCATGCGACTTCAGCGTTTCAAGTCAATCAGGAGACTGCAATATGGAACTCCACAGGTACTTTGATGTGTACAAGATCATTGATATGTATAGCTTGTATACTTCCAAGTGTTTCAGCGATGGAAGCAGCACCACAAGGAAATGGCCTGTTATCAAAGGCGTTGCTCCTCATTCATTGTCCAAATTTGATGGATGGCATCAAAGACCTGGAGCTGGATATGATCCTTGTGCATCTGATTATACCGAAGTGTACCTGAATAGGCCAGAAGTTCAAAAGGCATTGCATGCCAATATTACCAAAATTCCATATCCATGGACTCATTGCAGTGATACTATCAGATTTTGGAACGGTGCACCTTCATCAATGCTTCCGGTTATCAAGAAGCTTATTGCCGGGGGTCTTCGCGTTTGGGTCTTCAGTGGAGATACGGATGGAAGAATCCCTGTAACTGCGACAAGATACACTCTCAGGAAACTTGGACTCCGCATTGTTGAAGATTGGACCCCATGGTATACCAGCAAGCAGGTTGGGGGTTGGACTATTGTATATGATGGACTTACATTTGTGACCATTAGAGGAGCTGGCCATCAGGTTCCTACTTTTGCTCCCAAGCAAGCACTTCAGCTACTTCGACACTTCTTGCTCAATAAGAAATTGCCACTTGGACCAGTtta 1457 0.4338 MALRPFSLNLVLLLLIILAREAICVSTKTAAINRVQVLTQQESDRVVGLPGQPPVKFKQYAGYITVNENHGRALFYWFFESQDKPQEKPLLLWLNGGPGCSSIGYGEAEELGPFFPQNSTEPKLKLNPYSWNKAANLLFLESPVGVGFSYTNNSRDIDQLGDTITAKDSHTFIVKWFRRFPQFRSHEFYIAGESYAGHYVPQLSELIFDKNHNPTKKDYINFKGLMIGNALLDDETDQKGMIDYAWDHAVISDELYENIKNACDFSVSSQSGDCNMELHRYFDVYKIIDMYSLYTSKCFSDGSSTTRKWPVIKGVAPHSLSKFDGWHQRPGAGYDPCASDYTEVYLNRPEVQKALHANITKIPYPWTHCSDTIRFWNGAPSSMLPVIKKLIAGGLRVWVFSGDTDGRIPVTATRYTLRKLGLRIVEDWTPWYTSKQVGGWTIVYDGLTFVTIRGAGHQVPTFAPKQALQLLRHFLLNKKLPLGPV 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00130 485 Pfam Serine carboxypeptidase 50 476 IPR001563 GO:0004185|GO:0006508
Bva11g00130 485 Gene3D - 383 476 - -
Bva11g00130 485 Gene3D - 337 374 - -
Bva11g00130 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 140 150 IPR001563 GO:0004185|GO:0006508
Bva11g00130 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 176 201 IPR001563 GO:0004185|GO:0006508
Bva11g00130 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 447 460 IPR001563 GO:0004185|GO:0006508
Bva11g00130 485 PRINTS Carboxypeptidase C serine protease (S10) family signature 127 139 IPR001563 GO:0004185|GO:0006508
Bva11g00130 485 PANTHER CARBOXYPEPTIDASE 17 484 - -
Bva11g00130 485 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 17 484 IPR001563 GO:0004185|GO:0006508
Bva11g00130 485 SUPERFAMILY alpha/beta-Hydrolases 41 480 IPR029058 -
Bva11g00130 485 ProSitePatterns Serine carboxypeptidases, histidine active site. 447 464 IPR033124 GO:0004185
Bva11g00130 485 ProSitePatterns Serine carboxypeptidases, serine active site. 190 197 IPR018202 GO:0004185
Bva11g00130 485 Gene3D alpha/beta hydrolase 40 299 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00130 Bva-Chr11 3552768 3561529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00130 345 480 Calmodulin-binding Proteins AT2G22960 28.467 1.18e-13 67.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00130 11 3552768 3561529 Bva11g00130 11 3552768 3561529 ECH