Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g01033 atggagaagaCGCTATCGGCCAAGGACGCGTTCGAGAAGCTAGAGAAGGTGGGAGAAGGAACGTATGGGAAGGTGTACAGGGCAAGAGAGAAAGCAACAGGGAAGATCGTTGCCCTGAAGAAGACTCGCCTTCACGAGGACGAAGAAGGCGTCCCTCCCACCACTCTCCGTGAGGTTTCTATTTTGCGCATGCTCTCTAGGGATCCCCATGTCGTTAGATTGATGGATGTAAAACAAGGTCAGAACAAGGAAGGGAAGACAGTGCTCTACTTGGTGTTCGAGTTCATGGACACTGATCTCAAAAAATTCATTCGGAGTTTCCGTCAGACTGGGGAAAACATCCCTTCCAAAACCATCAACAGCTTGATGTTCCAACTCTGCAAGGGCGTGGCCTTTTGCCATGGTCATGGAATCTTGCACAGAGATTTGAAGCCTCATAACCTCCTGATGGACCGAAAAACAATGATGCTTAAAATAGCTGATCTTGGACTTGCTCGAGCATTTACTGTGCCAATCAAAAAATACACTCACGAGATACTAACCCTCTGGTACAGAGCTCCTGAAGTCCTCTTGGGAGCTACTCATTACTCAATGGCGGTGGATATTTGGTCTGTTGGCTGCATATTTGCTGAACTTGTCACCAAGCAAGCACTCTTTCCTGGTGATTCTGAGCTGCAACAACTCCTGCATATATTCAGGTTATTGGGAACTCCAAATGAAGAGGTATGGCCAGGCGTTagtaaattaatgaattggCACGAGTACCCGCAGTGGAGCCCTCAAAATCTGTCAACGGCCGTTCCTAATTTGGATGAGCTTGGACTGGATCTGTTGTCTCAAATGCTACAGTATGAGCCTTCCAAGCGGATTTCTGCGAAGAAAGCCATGGAACATCCTTACTTCGATGATTTAGACAAGACGTACCTTta 929 0.4607 MEKTLSAKDAFEKLEKVGEGTYGKVYRAREKATGKIVALKKTRLHEDEEGVPPTTLREVSILRMLSRDPHVVRLMDVKQGQNKEGKTVLYLVFEFMDTDLKKFIRSFRQTGENIPSKTINSLMFQLCKGVAFCHGHGILHRDLKPHNLLMDRKTMMLKIADLGLARAFTVPIKKYTHEILTLWYRAPEVLLGATHYSMAVDIWSVGCIFAELVTKQALFPGDSELQQLLHIFRLLGTPNEEVWPGVSKLMNWHEYPQWSPQNLSTAVPNLDELGLDLLSQMLQYEPSKRISAKKAMEHPYFDDLDKTYL 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g01033 309 PANTHER CELL DIVISION PROTEIN KINASE 6 307 - -
Bva10g01033 309 Gene3D Phosphorylase Kinase; domain 1 6 97 - -
Bva10g01033 309 SUPERFAMILY Protein kinase-like (PK-like) 8 305 IPR011009 -
Bva10g01033 309 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Bva10g01033 309 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Bva10g01033 309 Gene3D Transferase(Phosphotransferase) domain 1 99 308 - -
Bva10g01033 309 Pfam Protein kinase domain 11 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01033 309 SMART serkin_6 11 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01033 309 ProSiteProfiles Protein kinase domain profile. 11 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva10g01033 309 PANTHER - 6 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g01033 Bva-Chr10 7513282 7515236 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Bva10g01033 Pkinase 3.9e-70 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g01033 10 7513282 7515236 Bva10g01033 10 7513282 7515236 ECH