Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00980 ATGCCGCTAAACATTGCGGGAGCAGCTGCTGGCGCCCTGCTTTTATGTCTCactgtttctttctttgcaaTTACTTGGGCTGAAGATCCCTACAGGTTTTTCACCTGGAATGTTACTTATGGAGACATTTACCCACTTGGAGTTCGCCAAACGGGAATACTAATCAACGGGCAATTCCCAGGTCCAGACATTCACTCTGTTACCAATGACAATCTCATTATCAATGTCTTCAACAGCTTGGATGAACCCTTTCTCATTTCCTGGAACGGAGTGCAACAGAGAAGGAATTCATACGAAGATGGTGTATTCGGCACCACATGTCCCATCCCACCGGGCGGGAATTTCACTTACATTCTTCAAGTGAAGGATCAGATTGGAAGCTTTTATTACTTCCCATCTCTTGCATTCCACAAAGCAGCCGGTGGTTTTGGAGGCATTAGGATACTTAGCAGGCCAAGAATCCCGGTCCCCTTCCCGGATCCCGCCGGCGATTACACCGTTCTTATTGGAGACTGGTACAAGTCCAACCACACGACTTTGAGAGCCCATCTTGATGATGGTAACAAGTTGCCTTTTCCTGATGGAATCCTCATCAATGGTCGAGGACCTAACGGAGCATCCTTCAATGTCGAACAAGGGAAGACTTACAGACTAAGAATATCAAATGTGGGGTTGGAGAATTCTCTCAACTTCCGCATTCAAAACCACAAAATGAAGCTGGTTGAAGTGGAAGGAACACACACACTTCAAAATACGTACTCCTCATTGGACGTTCATGTTGGTCAATCTTATTCAGTTCTGGTGACCGCAGATCAGCCTGCTCAGGACTACTACATTGTGGTTTCCTCGAGATTCACCTCTCAGGTCCTCACCACCACTGGAATTCTTCGCTACAGCAACTCTGCAGGTCCAGTTTCAGGTCCACCTCCTGGTGGACCTACCATCCAAGTCGACTGGTCCCTCAATCAGGCTCGTTCTATCagGACTAACCTTACAGCAAGTGGACCAAGGCCTAATCCGCAAGGTTCCTACCATTACGGTCTCATCAACACAACCAAAACCATCATACTGTCAAGTTCAGCTGGTCAAGTGAATGGCAAGCAAAGATATGCAATCAACAGCGTGTCTTACATTGCCCCAGATACTCCTCTTAAGGTCGCCGACTATTTCAAAATCTCAGGCGTTTTCCGTGTGGGAAGCATATCTGACAGGCCCACTGGTGGTGGCATATACCAGGACACATCCGTAATGCATGCTGACTATAGAGCATTTGTTGAGATTGTTTTCCAAAATGACGAGGACATTGTTCAGAGCTATCATCTCGATGGCTACTCTTTCTTTGTGGTTGGCATGGATGGAGGACAGTGGACAACATCTAGCAGGAATTCGTACAATCTCCGAGATGCAATTGCACGTTGCACCACTCAGGTATATCCAAAGTCTTGGACTGCCATATATGTTGCACTTGACAATGTGGGAATGTGGAACTTGAGGTCCGAGTTTTGGGTGCGACAATACCTTGGGCAACAGTTCTATTTACGCGTTTATACAACATCAATCTCACTCAGAGACGAGTACCCGATCCCAAAGAATGCACTTCTTTGTGGTAGGGCAAAAGGGAGGCACACACGACCCCTTTG 1640 0.4646 MPLNIAGAAAGALLLCLTVSFFAITWAEDPYRFFTWNVTYGDIYPLGVRQTGILINGQFPGPDIHSVTNDNLIINVFNSLDEPFLISWNGVQQRRNSYEDGVFGTTCPIPPGGNFTYILQVKDQIGSFYYFPSLAFHKAAGGFGGIRILSRPRIPVPFPDPAGDYTVLIGDWYKSNHTTLRAHLDDGNKLPFPDGILINGRGPNGASFNVEQGKTYRLRISNVGLENSLNFRIQNHKMKLVEVEGTHTLQNTYSSLDVHVGQSYSVLVTADQPAQDYYIVVSSRFTSQVLTTTGILRYSNSAGPVSGPPPGGPTIQVDWSLNQARSIRTNLTASGPRPNPQGSYHYGLINTTKTIILSSSAGQVNGKQRYAINSVSYIAPDTPLKVADYFKISGVFRVGSISDRPTGGGIYQDTSVMHADYRAFVEIVFQNDEDIVQSYHLDGYSFFVVGMDGGQWTTSSRNSYNLRDAIARCTTQVYPKSWTAIYVALDNVGMWNLRSEFWVRQYLGQQFYLRVYTTSISLRDEYPIPKNALLCGRAKGRHTRPL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00980 546 Pfam Multicopper oxidase 382 517 IPR011706 GO:0005507|GO:0016491
Bva10g00980 546 PANTHER MULTI-COPPER OXIDASE 10 539 IPR045087 -
Bva10g00980 546 Gene3D - 347 543 IPR008972 -
Bva10g00980 546 CDD CuRO_3_AAO_like_1 380 500 IPR034275 GO:0005507
Bva10g00980 546 Gene3D - 162 336 IPR008972 -
Bva10g00980 546 SUPERFAMILY Cupredoxins 348 537 IPR008972 -
Bva10g00980 546 SUPERFAMILY Cupredoxins 26 178 IPR008972 -
Bva10g00980 546 CDD CuRO_2_AAO_like_1 163 298 IPR034271 -
Bva10g00980 546 Pfam Multicopper oxidase 164 300 IPR001117 -
Bva10g00980 546 PANTHER MULTI-COPPER OXIDASE-LIKE PROTEIN 10 539 - -
Bva10g00980 546 CDD CuRO_1_AAO_like_1 33 148 IPR034273 GO:0005507
Bva10g00980 546 Pfam Multicopper oxidase 38 151 IPR011707 GO:0005507
Bva10g00980 546 SUPERFAMILY Cupredoxins 158 338 IPR008972 -
Bva10g00980 546 Gene3D - 31 152 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00980 Bva-Chr10 7237799 7243231 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00980 10 7237799 7243231 Bva06g01859 06 12748410 12753226 BWGD
Bva10g00980 10 7237799 7243231 Bva10g00980 10 7237799 7243231 ECH