Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00891 ATGAACATGAGTAGTCCTGAATATAGACAGAGTAAGTCAATGGAACGAATCAATTCAGCATTTGGTTCATCCTCAGGAGCTGCACCTAGACCACAAAACCGATTAAGTGCTGAGAACCATAAACCTGGAATCCCACCATCCCATCCCAATCTCTCACCTTCAACCCCTTATGGGTCACACTCGGCTTCCCATAGGATGCGTTCTCCAAATATGAGTCCAGGATCTTCCCACTCCCGCTCATTGTCTCAACCGCCCTTTTTTTCACTTGATTCTTTGCCACCATTGAGTCCCTCCCCTTACCGTGAGCCTTCGGTATCCTCTCTTTCTGATCCCATTTCAACTGACGTATCTATGGAAGAAAGTGCAGTTAATTCTCATGCTCCTGCACCTTCAGTCCCAGCCAACAGCAGAGGTTATGCATTTCAGGTTGCTCCTAGTCTTCCTCCCCGTAAGGGACACAGGCGCTCTAGCAGTGATACTCCACTAGGAATTTCTAGTTTCATTCAATCTTCTCCTCAGTTTGTTCCCGCTGGGACTTGGAGAGAACTGGATAACCTTGGTTCTAGAGGAGAAAGCTCAGTTTCTCAGAAGCCAATTCAGTTGGTGAAAAGGGAATCAACTAAGGTTGGGGACCATGATGTATACAATGCAGAACTGATGCATGAGAGTAAACAGGATATGATGGATGATTTACTCAGCTCATACATGAATTTTGACAACTTTGATAATCTGCACTTCTCTGGTATGGAAGATAAGGATTTGGATAGTAGAACCAGTGGTTCAAAGACTGTTGAAAGCAGCGATAATGAAGTTGAGAGTCATGTAAATGGAAAAACAACCAGTATGCAAGGGATGACTTCAAGCTGTGCTGAAGAAAAGAGGGAAGGAATCAAGAGGAGTTCTAATGGAGACATTGCACCAGCAGGCCGACATAGGAGAAGTTTCTCATTGGATAGTTCCATAGGAAATTTGCATATCGAAGATGAATTGCCTAAGCTTCCACCTTTGGGAAATCGAGTTGATCAACACTCACCTAGTAACTCAATTGATGGTAAAACATCTGAAGTCAGCATGGAATTTGGAAATGGTGAATTCAACTCAGtggagttaaaaaaaataatggaaaatgACAAACTTGCTGAGATTGCCTCGTCGGACCCCAAACGTGCAAAAAGGATTTTGGCTAACCGTCAATCGGCTGCTCGATCAAAGGAGAGAAAGATGCGGTACATTGGTGAACTGGAGCACAAGGTGCAAACTCTTCAGACGGAGACAACTACATTGTCTACTCAGTTTACCAAATTACAAAGAGACCATTCGGAGCTAAAAAGTGAGAACAACGAGTTGAAATTCAGGGTTCAAGCCATGGACCAACAATCACAACTGAAAGATGCTCTGAATGAAACATTGACTGCTGAAGTCCAGCGTTTAAGGCGTACGGTGGCAGAACTTGGTGGGGATTCCCTCCTCTCAGGATGCATGGCTCGCCAACTTGCTATTAACCAACAAAGATTCCAGTTACAGAATCAACAATCCGGACACTCAAATGTAAAGCCACCTTCTTCAGCATG 1571 0.436 MNMSSPEYRQSKSMERINSAFGSSSGAAPRPQNRLSAENHKPGIPPSHPNLSPSTPYGSHSASHRMRSPNMSPGSSHSRSLSQPPFFSLDSLPPLSPSPYREPSVSSLSDPISTDVSMEESAVNSHAPAPSVPANSRGYAFQVAPSLPPRKGHRRSSSDTPLGISSFIQSSPQFVPAGTWRELDNLGSRGESSVSQKPIQLVKRESTKVGDHDVYNAELMHESKQDMMDDLLSSYMNFDNFDNLHFSGMEDKDLDSRTSGSKTVESSDNEVESHVNGKTTSMQGMTSSCAEEKREGIKRSSNGDIAPAGRHRRSFSLDSSIGNLHIEDELPKLPPLGNRVDQHSPSNSIDGKTSEVSMEFGNGEFNSVELKKIMENDKLAEIASSDPKRAKRILANRQSAARSKERKMRYIGELEHKVQTLQTETTTLSTQFTKLQRDHSELKSENNELKFRVQAMDQQSQLKDALNETLTAEVQRLRRTVAELGGDSLLSGCMARQLAINQQRFQLQNQQSGHSNVKPPSSA 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00891 523 Gene3D - 388 441 - -
Bva10g00891 523 SUPERFAMILY Leucine zipper domain 388 444 IPR046347 GO:0003700|GO:0006355
Bva10g00891 523 Pfam bZIP transcription factor 388 446 IPR004827 GO:0003700|GO:0006355
Bva10g00891 523 MobiDBLite consensus disorder prediction 53 89 - -
Bva10g00891 523 CDD bZIP_plant_RF2 389 461 IPR044759 GO:0003700|GO:0006355
Bva10g00891 523 MobiDBLite consensus disorder prediction 251 312 - -
Bva10g00891 523 MobiDBLite consensus disorder prediction 186 202 - -
Bva10g00891 523 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 386 449 IPR004827 GO:0003700|GO:0006355
Bva10g00891 523 PANTHER BZIP TRANSCRIPTION FACTOR 63 513 - -
Bva10g00891 523 MobiDBLite consensus disorder prediction 158 176 - -
Bva10g00891 523 MobiDBLite consensus disorder prediction 1 206 - -
Bva10g00891 523 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 63 513 - -
Bva10g00891 523 MobiDBLite consensus disorder prediction 101 121 - -
Bva10g00891 523 MobiDBLite consensus disorder prediction 273 288 - -
Bva10g00891 523 Coils Coil 432 459 - -
Bva10g00891 523 MobiDBLite consensus disorder prediction 1 32 - -
Bva10g00891 523 SMART brlzneu 384 448 IPR004827 GO:0003700|GO:0006355
Bva10g00891 523 Coils Coil 467 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00891 Bva-Chr10 6781361 6784747 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva10g00891 bZIP_1 2.2e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00891 10 6781361 6784747 Bva10g00891 10 6781361 6784747 ECH