Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva10g00890 ATGGATGATGCTGGGCATCGTGAAAATGGAAGGCACAAAGCAGATCAATATAAATCAACTCAGGGACAGTGGTTGATGCAACATCAGCCATCCATGAAACAAATTATGGCAATAATGGCTGAAAGAGACGCAGCCATTCATGAAAGAAATCTGGCCTTGTCTGAAAAAAAGGCAGCCCTTGCAGAGCGTGACATGGCATTCCTGCAGCGAGATACTGCCATTGCAGAACGAAATAATGCTATAATGGAACGAGATAATGCAATTGCAACCCTTCAGTATCGAGAAAACTCTTTAGCTAGTAGTAGTATGTCTTCGTGTCCTCCAGGATGCCAAATCTCTCGTGGGTTAAAGCACATGCATCATCCCCAGCAACAGGTGCACCATATACCTAACATGGGTGATGCTTCTTACAGCACACGGGAGATGCAAACAAGTGATGCACTTCCTGCAGCACCCACTCCTTCCGAGCCTGGGAAGGCACGACGAGCCAAACGCCCAAAGGAGGGTAAATCAAGTTCACCCAATAAGAAGACCCCAAAATCTGCAAGAAAGATCAAGAGAGACAGTGAAGACTTGAATAAGATGATGTTTGGCAAGGCAGAGTGGAAGGGCGGTCAAGAAATGGTTAACGGAGGTGATGATCTTAACAAGCAGTTAGTGGTGTCAAAGGCTGATTGGAAAGGTCAGGATTTGGGGTTGAACCAAGTAGCATACGACGAGTCAACCATGCCAGCGCCAGTGTGCTCTTGCACTGGTGTCCTGAGACAGTGCTACAAATGGGGGAATGGGGGTTGGCAGTCTGCTTGTTGTACAACGACCATATCAATGTATCCACTTCCAGCAGTCCCTAACAAGAGGCACGCCCGGGTAGGAGGTCGAAAGATGAGTGGAAGTGCTTTCAATAAGCTGCTTAGCCGGCTCGCTGCAGAAGGCCATGATCTGTCAAACCCAGTTGACCTCAAGGACCATTGGGCTAAACACGGTACAAACCGCTACATCACAATTAAGTA 1010 0.4762 MDDAGHRENGRHKADQYKSTQGQWLMQHQPSMKQIMAIMAERDAAIHERNLALSEKKAALAERDMAFLQRDTAIAERNNAIMERDNAIATLQYRENSLASSSMSSCPPGCQISRGLKHMHHPQQQVHHIPNMGDASYSTREMQTSDALPAAPTPSEPGKARRAKRPKEGKSSSPNKKTPKSARKIKRDSEDLNKMMFGKAEWKGGQEMVNGGDDLNKQLVVSKADWKGQDLGLNQVAYDESTMPAPVCSCTGVLRQCYKWGNGGWQSACCTTTISMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva10g00890 336 PANTHER - 1 336 IPR010409 -
Bva10g00890 336 Coils Coil 51 71 - -
Bva10g00890 336 MobiDBLite consensus disorder prediction 158 174 - -
Bva10g00890 336 MobiDBLite consensus disorder prediction 1 15 - -
Bva10g00890 336 Pfam GAGA binding protein-like family 1 336 IPR010409 -
Bva10g00890 336 MobiDBLite consensus disorder prediction 1 21 - -
Bva10g00890 336 SMART GAGA_bind_2 1 336 IPR010409 -
Bva10g00890 336 MobiDBLite consensus disorder prediction 118 191 - -
Bva10g00890 336 PANTHER PROTEIN BASIC PENTACYSTEINE6 1 336 - -
Bva10g00890 336 MobiDBLite consensus disorder prediction 129 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva10g00890 Bva-Chr10 6774793 6778677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva10g00890 65 336 BBR or BPC Transcription factor family AT5G42520 66.202 3.70e-125 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Bva10g00890 GAGA_bind 5.8e-109 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva10g00890 - - gmx:100783502 617.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva10g00890 10 6774793 6778677 Bva10g00890 10 6774793 6778677 ECH